Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0303 ATGGATTTCTTTGCTTATTGCAACTATTTCCACACTGACAAGCgagacaaagaagaagaagacgacgacGACTCTGAGATGAATGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGGGTGTtcgagttttcttcttctttttcagaTTCGTTTCctctgcatcatcatcatcatcatcatcagccaCCACCACAACAAAAGTGGACCTGCGACGAAGAATTTTGCTATGTGGGTACTGAGCCCACGTCTGTTCTTGACGCCACAAGAAGCCCAAGCCCTCCCACATCGTCCTCTTCAACCATGACTTCTCACGGCAGCAATAGTGGCTCAACAAATAGCACCACCACAGCCGGTGCCGCCGccgcagcagcagcagcagcagcgaCAGCCTCGGAAAACCCGTCTCAGGCAGCCTTAGCCACATCCAGCGCTGATAAATGTGGGCTGGGAATGGAGGATTGGGAGGGTGTGTTGTCTGAGTCACCACCAGGTCAAGATCAGTCTATTCTGAGATTAATAATGGGTGATATTGAAGACCCATCTTCTGGATTGAACAATCTCTTGCAGACCAGTGTTGGGACTCAAATGGTTGATTTCAATGGAGGTTTTGGGGTTGTGGATCAAGGGTTTGAGCTTGAACCTGTAACTTGTGGGGGTGGGAATATAGTGAGTAATATTGCAGAACCCATTTTCTCAGCTTCAGCTAGCAATCCTCTAATGGTGTCAATGTCAACATCTCCCTTGATGTTCAATTCTCAGCAGCAGCAGCAAGTGATTTCAATCGTGGACGATAAGATAAACCGAAATCAAGTTCATTTCTCGGAGAACCCATCATTCTTTATGCCCTTGACATACCCAGAATTGCAACAAGAGCAGCAAGTTTCGCCTCAGCCTCAAGCGAAACGCCTTCTCTGTGACACAATTGGGCAAAACTATCATGTCCCAAAGTCACCTTTTCTGGATTCAGGACAAGAGCTATTTACTAGGAGGCAGCATCTGCAGCTTCCTTCACATCCTCAACACCTGCAGCAATGGCAGTCCTTCATCGAGCCACCGGCGAAACAGCCGAAGGTGAGCTCGACGACCGGCAATGATTTGGCGACCCACCAGCTTCAGCAGACTATAATTGACCATATATTCAAGGCTGCAGAGCTCATTGAAGCTGGTAATCAAGTACATGCACACGGGATATTGGCGCGGCTCAATCACCAGCTTTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAAGCCTTGCAGTTACTGCTACATTCGGATGCACAAAGTTTATTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGAGCTTATAAGTCATTCTCTGAGATATCGCCGGTTCTTCAGTTTGCCAATTTTACTTGTAATCAAGCCCTCATTGAAGCTGTGGAAAGGTTTGATCAAATTCACattattgattttgatatcGGTTTTGGAGTGCAATGGGCTTCTTTTATGCAAGAGCTGGCCTTGAGAAATGGTGGTGCACCATCTCTAAAAGTCACTGCTGTTGTGTCCCCATCCACTTGTGACGAAATCGAGCTCAGTTTCACTCGAGAAAGCTTGAAACAATATGCCAAAGAAATCAACATGTCCTTTGAACTCAATGTTATGAGCATTGAATCATTAAACTCTTCCCTCCCTGGTCTATCCCCCGACACCGAGGCAATAGCTGTGAATTTGCCAGTTTCGTGCTTCTCAAATCACCCGTCATCCTTCTCTTCGGCCCTTCGCTTCGTAAAGCAGCTCATGCCGAAAATTGTGGTAACTTTGGATCGAAATTGCGATCGAATCGATGTTCCGTTCCCCCACAATCTAATCCACGCACTTCAATCTTATTCAGCCTTGCTTGAATCACTGGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATCGAGAGGCACTTCGTCCAACCGGCCATTGAGAAGATCATACTGGGTCGCCACCATTCGCGAGAAAAGCTACCTCCATGGAAGAACCTGTTTCTCTCAGCTGGTTTCTCCCCATTCTCTTTTAGTAACTCCACAGAAGCTCAAGCAGAGTGCTTGGTGCAGAGGGCACCTGTGAGGGGATTTCAAGTGGAGAGGAAGCACTCATCTCTTGCACTATGCTGGCAGAGGAAGGAACTTGTCTCGGTTTCGACATGGAGATGCTGA 2199 0.4443 MDFFAYCNYFHTDKRDKEEEDDDDSEMNAMPLPFEEFQGKGVFEFSSSFSDSFPLHHHHHHHQPPPQQKWTCDEEFCYVGTEPTSVLDATRSPSPPTSSSSTMTSHGSNSGSTNSTTTAGAAAAAAAAAATASENPSQAALATSSADKCGLGMEDWEGVLSESPPGQDQSILRLIMGDIEDPSSGLNNLLQTSVGTQMVDFNGGFGVVDQGFELEPVTCGGGNIVSNIAEPIFSASASNPLMVSMSTSPLMFNSQQQQQVISIVDDKINRNQVHFSENPSFFMPLTYPELQQEQQVSPQPQAKRLLCDTIGQNYHVPKSPFLDSGQELFTRRQHLQLPSHPQHLQQWQSFIEPPAKQPKVSSTTGNDLATHQLQQTIIDHIFKAAELIEAGNQVHAHGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSDAQSLLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDQIHIIDFDIGFGVQWASFMQELALRNGGAPSLKVTAVVSPSTCDEIELSFTRESLKQYAKEINMSFELNVMSIESLNSSLPGLSPDTEAIAVNLPVSCFSNHPSSFSSALRFVKQLMPKIVVTLDRNCDRIDVPFPHNLIHALQSYSALLESLDAVNVNLDVLQKIERHFVQPAIEKIILGRHHSREKLPPWKNLFLSAGFSPFSFSNSTEAQAECLVQRAPVRGFQVERKHSSLALCWQRKELVSVSTWRC 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0303 732 MobiDBLite consensus disorder prediction 85 117 - -
Sto6g0303 732 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 731 IPR005202 -
Sto6g0303 732 ProSiteProfiles GRAS family profile. 368 731 IPR005202 -
Sto6g0303 732 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 33 731 - -
Sto6g0303 732 Pfam GRAS domain family 378 731 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0303 Sto-Chr6 3499300 3501781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0303 377 732 GRAS Transcription Factor Family AT4G00150 57.778 1.96e-131 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g0303 GRAS 1.8e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0303 - - gmx:100801785 820.461