Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0302 ATGATCGAATCCGGCTCGCCGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAGCTTTCCCCAATTGGCAAGCCTTTCCAGAGGGCAGCATTCTACATGAAAGAAGCCTTACTTCAATTGCTCACAAACCCCACTTCTTCCTTCTCACCCACCTCACTTCTTCTCAAAATCGGAGCTTACAAATCCTTCTCAGAAATCTCCCCACTCCTCCAATTCGCCAACTTCACCTCCAACCAAGCCCTCCTCGAAGCCGTCGATGGCTTCACCCAAATCCACATCATCGATTTCGACATTGGCTTCGCTTCTCGTCCATACCCTCCAGTCGTATTCGACTCTGCTCGAGTCCCTCGATGCCGCGAATGTGAATCTCGACGTTCTCCAGATGATCGAGAAGTACTATGTCCAGCCGGCGATGGAGAAGGTCGTGTCGGGTCGTCGCGAGAGGGTCGCCGTGGCGGCCGCTCCGTGGAGGACTCTGTTTCTGAGCTGCGGGTTCTCGCCGGCGGCGTTCAGCGGCTTCACGGAGACGCAGGCGGAGTGTTTGGTTCAGAGGAGTCATGCGAGAGGGTTTCATGTGGAGAAGAGGCAGTCTTCTTCCTCGATTGTGCTGGGGTTTCAGAGGAAGGATTTGATTTCGGTATCGAGTTGGAGATGCTGCTGAGGAGGCGTTTCGGCCACCAGGTGGCCGAAACGCCTGCAAGAATGCCTGCaaaggtgtttcggccacctCCTGGCCGAAACACCTTTGCAGGCATTGATGCCCGTGCCTGCTTGGGCACGGGCACCAAACCACGGGTGTTTCGGCCACCTGGTGGCCGAAACACCCGTGTAGTCACGTCTGAGTGCTCAGTTTGA 861 0.5505 MIESGSPELAHGILARLNHQLSPIGKPFQRAAFYMKEALLQLLTNPTSSFSPTSLLLKIGAYKSFSEISPLLQFANFTSNQALLEAVDGFTQIHIIDFDIGFASRPYPPVVFDSARVPRCRECESRRSPDDREVLCPAGDGEGRVGSSREGRRGGRSVEDSVSELRVLAGGVQRLHGDAGGVFGSEESCERVSCGEEAVFFLDCAGVSEEGFDFGIELEMLLRRRFGHQVAETPARMPAKVFRPPPGRNTFAGIDARACLGTGTKPRVFRPPGGRNTRVVTSECSV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0302 286 ProSiteProfiles GRAS family profile. 1 286 IPR005202 -
Sto6g0302 286 MobiDBLite consensus disorder prediction 130 158 - -
Sto6g0302 286 PANTHER SCARECROW-LIKE PROTEIN 6 1 102 - -
Sto6g0302 286 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 102 IPR005202 -
Sto6g0302 286 Pfam GRAS domain family 2 102 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0302 Sto-Chr6 3463169 3474803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0302 9 102 GRAS Transcription Factor Family AT4G00150 70.526 3.92e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g0302 GRAS 1.1e-25 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0302 - - gmx:100792973 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0302 6 3463169 3474803 Sto6g0302 6 3463169 3474803 ECH