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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sto6g0238
ATGTTGGACTACGAATGGGGGAATCCCAACACTATAATGCTCACCGGCAACGACGAGGCGGCGGTGGCGGATTCCGACCATAATAACCACCGTCAAATCTTCGACCACTACGCGTTCTTGCCGGACCATCTCATTTCTCAGGCGCCGGCGGGGCCCACACCAACGACCACCAACACCGCCGTGGATTTCTCCCTACAGTACCATCACCTTAACCTGCAGGCTCACCACCAGCACTCGCTCTTCGACCCACGCGCCTTCCATGGCGCGTCGTCTTCCCCGTTCCATCCTCCTCCACCCCAGCCTCAACCACCACCgcctcctcatcatcatcatcatcactctATGTTCTCGCTTGACCCGCTGCCTCCGGTCAACGGTGGGAGCAACTGTGGGCCCGGTGGGCTTCTGGTGGTGCCGAAGTCCGAGGAGGTGGGTCGGCCCATGGACTTCGCGGCGTCTCGAATTGGGCTGAACCTGGGCGGCCGGACGTACTTCGCTTCGTCCGAGGACGACTTCGTGAGCCGGCTCTACCGCCGGTCCAGGCCGATGGGGGCGGAAGGGGTGGTGGGCTCGGCGACGACGACGACGTCGTTTAGCAACAGTAACTCGTCCCCGAGATGCCAAGCTGAGGGATGTAATGCGGATCTGTCCCACGCGAAGCACTACCACCGCCGACACAAGGTGTGCGAGTTTCACTCCAAGGCCGCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGCAGCAGGTTCCATCTTCTGTCGGAGTTCGATAACGGAAAACGTAGCTGCCGGAAAAGGCTGGCGGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCCATCGAGTCTTCAAGAAACCCAGAAATCCCACCTCGATAATACTCGCAATTCTACTTTGGACACTAGTCTCGCAAGGTCCCCACCGGAATCTGGAGCTCAGACATCTTCATCGGTGACGGTGGCAGTGTCGCCGCCGGACTATTTCCGGCAAAGGCCGTATCAAAGTACAAGCTCTTCAACAACATCAAGCACACTGTTTTTCTCAAGTGGgtag
1065
0.57
MLDYEWGNPNTIMLTGNDEAAVADSDHNNHRQIFDHYAFLPDHLISQAPAGPTPTTTNTAVDFSLQYHHLNLQAHHQHSLFDPRAFHGASSSPFHPPPPQPQPPPPPHHHHHHSMFSLDPLPPVNGGSNCGPGGLLVVPKSEEVGRPMDFAASRIGLNLGGRTYFASSEDDFVSRLYRRSRPMGAEGVVGSATTTTSFSNSNSSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPSSLQETQKSHLDNTRNSTLDTSLARSPPESGAQTSSSVTVAVSPPDYFRQRPYQSTSSSTTSSTLFFSSG
354
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sto6g0238
354
ProSiteProfiles
Zinc finger SBP-type profile.
204
281
IPR004333
GO:0003677
Sto6g0238
354
Gene3D
-
197
268
IPR036893
GO:0003677|GO:0005634
Sto6g0238
354
MobiDBLite
consensus disorder prediction
270
354
-
-
Sto6g0238
354
MobiDBLite
consensus disorder prediction
83
124
-
-
Sto6g0238
354
PANTHER
SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8
95
338
-
-
Sto6g0238
354
MobiDBLite
consensus disorder prediction
284
354
-
-
Sto6g0238
354
SUPERFAMILY
SBT domain
205
283
IPR036893
GO:0003677|GO:0005634
Sto6g0238
354
PANTHER
SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
95
338
IPR044817
GO:0003677
Sto6g0238
354
Pfam
SBP domain
207
280
IPR004333
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sto6g0238
Sto-Chr6
2715030
2717050
Dispersed/Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sto6g0238
1
254
SBP-box Gene Family
AT1G02065
45.221
8.95e-55
178
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
SBP
Sto6g0238
SBP
1e-30
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sto6g0238
-
-
gmx:100778566
410.223
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Sto6g0238
6
2715030
2717050
Sto6g0238
6
2715030
2717050
ECH
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