Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0233 ATGACCAATGGAAGCTTAGAGAAATGGCTGCATCCAGAAATAGAAAATGCAAATCATCCAAGAAACCTTCTCTTTGATCAAAGATTAAATATCATTATTGATGTTGCTTCTGCTTTACATTATCTTCACTATGAATGTGAGCAACCTATCATTCACTGTGACTTAAAGCCAAGTAATGTCCTTCTTGATGGAGACATGGTGGCTCACGTGAGTGATTTTGGGCTAGCAAAACTAGTCTCAACAATAAGAGGCAATTCTAACAGACAAAGCAGCACAATTGGGATAATGGGTACCATCGGCTATGCTCCTCCAgAATATGGAATGGGTTCTGAAGCATCAACACAAGGTGACATGTATAGTTTTGGAATTCTCATAATGGAAATGTTTACCGGAAGAAGAAGACCCACATATGAAATATTTGCTGATGGTCAGAATCTTCATAACTACGTCAAAGTTACGTTTCCAAATAATCTTTTGCAAATTGTGGATCCAAATCTATTCCCAAGAGAAGCAAAAGTAACAGAAAATGAAGAAGCAAACAATGAGATCCTAACCCTTATTCATCCTAATGTGGAAAAGTGCTTATCTTCAATCTTTAGGATTGGACTTTGCTGTTCAGTTGAATCACCAAGTGAAAGAATGAGTATAAGAGATGTTATTAGGGAGCTAAATCATATCAGAGATGTTGCTTCTTCATACAtgtga 705 0.3645 MTNGSLEKWLHPEIENANHPRNLLFDQRLNIIIDVASALHYLHYECEQPIIHCDLKPSNVLLDGDMVAHVSDFGLAKLVSTIRGNSNRQSSTIGIMGTIGYAPPEYGMGSEASTQGDMYSFGILIMEMFTGRRRPTYEIFADGQNLHNYVKVTFPNNLLQIVDPNLFPREAKVTENEEANNEILTLIHPNVEKCLSSIFRIGLCCSVESPSERMSIRDVIRELNHIRDVASSYM 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0233 234 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 231 - -
Sto6g0233 234 Pfam Protein kinase domain 3 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0233 234 SUPERFAMILY Protein kinase-like (PK-like) 1 223 IPR011009 -
Sto6g0233 234 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0233 234 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0233 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Sto6g0233 234 Gene3D Transferase(Phosphotransferase) domain 1 1 233 - -
Sto6g0233 234 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0233 Sto-Chr6 2680811 2682123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0233 1 228 Receptor kinase-like Gene Family AT3G47570 49.351 9.70e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g0233 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0233 - - ccaj:109792361 307.375