Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0222 ATGGCCGGAAAAGGTGAAGGGCCGGCGATCGGGATAGATCTCGGCACCACTTACTCGTGCGTCGGAGTGTGGCAGCACGATCGCGTTGAGATCATCGCTAATGATCAAGGGAACCGAACGACGCCGTCTTATGTGGCTTTTACAGATAGCGAAAGGTTGATCGGGGATGCAGCGAAGAATCAAGTCGCTATGAACCCGACAAACACCGTATTTGATGCTAAGAGGTTAATTGGTAGGAGAATCAGCGACCCCTCCGTCATTGCTGGTGCTGGCGAGAAGCCCATGATTGTTGTTAATTATAAGGGTGAAGATAAGCAATTTGCTGCTGAGGAGATCTCATCCATGGTTCTTATCAAGATGCGTGAGATTGCAGAGGCTTACCTTGGTTCCACAGTGAAGAACGCTGTTGTCACTGTGCCTGCTTACTTCAACGACTCTCAGCGTCAAGCTACCAAAGATGCCGGTGTGATTGCAGGTCTGAATGTTATGCGGATTATTAACGAGCCCACTGCTGCAGCTATTGCATATGGGCTTGACAAGAAAGCTACTAGCGTGGGTGAGAAAAACGTGTTAATCTTTGATCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTCACCATTGAGGAGGGTATCTTTGAAGTAAAGGCCACTGCTGGAGACACTCACCTTGGAGGGGAGGACTTTGATAACAGATTGGTAAATCACTTCGTACAGGAGTTCAAGAGGAAGAACAAAAAAGACATTAGTGGAAACCCCAGAGCACTTAGGAGGTTGAGAACAGCTTGTGAGAGGGCTAAGAGGACACTCTCATCCACTGCCCAGACCACCATTGAGATCGATTCTTTATTTGAGGGCATTGACTTCTATTCAACAATCACTCGTGCCAGGTTTGAGGAACTGAACATGGACCTCTTTAGGAAGTGTATGGAACCTGTGGAGAAGTGTCTTAGAGATGCCAAGATGGACAAGAGCAGCATCCATGATGTTGTCCTTGTTGGTGGCTCTACCAGAATTCCTAAAGTGCAACAACTATTGCAGGACTTCTTCAATGGCAAGGATCTCTGCAAGAGCATCAACCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTATTTTGAGTGGTGAAGGTAATGAGAAGGTTCAAGACTTGTTGCTGCTGGATGTTACCCCACTATCCCTAGGTTTGGAAACTGCTGGAGGTGTAATGACTGTACTAATCCCTAGGAATACAACTATTCCTACCAAGAAAGAGCAAGTATTCTCCACCTACTCAGATAATCAACCCGGTGTGTTGATTCAAGTATACGAAGGTGAGAGAACAAGAACTAGGGACAACAACTTGCTGGGTAAGTTCGAACTGTCAGGAATCCCTCCAGCTCCTAGGGGTGTTCCACAGATCACAGTTTGCTTTGATATTGATGCCAACGGCATATTGAATGTCTCTGCTGAGGACAAAACAACCGGGCAAAAGAACAAGATTACCATCACCAACGACAAAGGAAGACTATCAAAGGATGAAATAGAGAAGATGGTTCAAGAAGCTGAGAAATACAAGGCTGAAGACGAGGAACACAAGAAGAAGGTGGAAGCCAAGAACGCCTTGGAGAACTACTCGTACAACATGAGGAACACCATAAAGGATGAGAAGATCAGTTCAAAGCTTACCCCAGAAGACAAGACCAAGATTGAGGAGGCAATTGATCAGGCCATACAATGGCTTGACGCTAACCAATTGGCAGAGGCTGATGAATTCGAGGACAAAATGAAGGAGTTGGAGAGCATCTGTAACCCCATTATAGCCAAGATGTACCAAGGTGGCGCTGATGCAGGTGgtgccatggatgatgatgccCCCCCTGCTTCTGGTAGTGGTGCTGGTCCCAAAATTGAGGAGGTTGATTAA 1911 0.461 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRISDPSVIAGAGEKPMIVVNYKGEDKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYSYNMRNTIKDEKISSKLTPEDKTKIEEAIDQAIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGADAGGAMDDDAPPASGSGAGPKIEEVD 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0222 636 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 380 534 IPR029047 -
Sto6g0222 636 Coils Coil 507 534 - -
Sto6g0222 636 Gene3D - 10 373 - -
Sto6g0222 636 ProSitePatterns Heat shock hsp70 proteins family signature 3. 329 343 IPR018181 -
Sto6g0222 636 CDD HSPA1-2_6-8-like_NBD 9 376 - -
Sto6g0222 636 MobiDBLite consensus disorder prediction 608 636 - -
Sto6g0222 636 PANTHER HEAT SHOCK PROTEIN 70KDA 1 617 IPR013126 GO:0005524|GO:0140662
Sto6g0222 636 Gene3D Actin; Chain A, domain 4 225 307 - -
Sto6g0222 636 Pfam Hsp70 protein 9 607 IPR013126 GO:0005524|GO:0140662
Sto6g0222 636 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 617 - -
Sto6g0222 636 SUPERFAMILY Actin-like ATPase domain 8 180 IPR043129 -
Sto6g0222 636 Gene3D - 535 608 IPR029048 -
Sto6g0222 636 SUPERFAMILY Actin-like ATPase domain 187 377 IPR043129 -
Sto6g0222 636 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 532 612 IPR029048 -
Sto6g0222 636 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sto6g0222 636 Gene3D - 71 115 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 8 21 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 36 48 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 58 66 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 135 155 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 198 208 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 326 342 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 358 378 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 385 404 - -
Sto6g0222 636 PRINTS 70kDa heat shock protein signature 466 482 - -
Sto6g0222 636 ProSitePatterns Heat shock hsp70 proteins family signature 2. 192 205 IPR018181 -
Sto6g0222 636 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 381 538 IPR029047 -
Sto6g0222 636 Gene3D - 181 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0222 Sto-Chr6 2564874 2567434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0222 1 636 Calmodulin-binding Proteins AT3G12580 91.692 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0222 K03283 - gmx:100789485 1172.15