Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0185 CTGtgcaagaagaggaagaaaattaGTGATGACGAGAAGGAGAATGATGatagtagtaataataataataataataataatagtaagcATCCGACGTATAGAGGCGTGAGGATGAGGAATTGGGGGAAATGGGTGTCGGAGATTCGCGAGCCGAGGAAGAAGTCGAGGATATGGCTCGGGACGTATCCGACGGCGGAGATGGCGGCTCGAGCCCACGACGTGGCCGCTCTAGCCATTAAGGGTCGTTCGGCTTATCTCAATTTCCCGGAGCTGGCTCCTGCGCTGCCCCGCCCGGCTTCCACGGCTCCTAAGGACATCCAAGCCGCGGCTGCCAAGGCTGCAGCCACCGTCTTCGAGCCTGATCATGAGCAGCTGGCtggtaatgatgatgataataataataataataatagtagtaaTGATCAGCTGGTGGAGCCGAGCCGAGCCGAGAAGTCTTCTTCTTTTTGGTTTTACAGAGATATAAAAGGATACAGATCCAGAAATGAATTAGCTTAA 516 0.4516 LCKKRKKISDDEKENDDSSNNNNNNNNSKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRSAYLNFPELAPALPRPASTAPKDIQAAAAKAAATVFEPDHEQLAGNDDDNNNNNNSSNDQLVEPSRAEKSSSFWFYRDIKGYRSRNELA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0185 171 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Sto6g0185 171 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 141 - -
Sto6g0185 171 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Sto6g0185 171 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 MobiDBLite consensus disorder prediction 1 18 - -
Sto6g0185 171 MobiDBLite consensus disorder prediction 129 149 - -
Sto6g0185 171 MobiDBLite consensus disorder prediction 19 33 - -
Sto6g0185 171 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Sto6g0185 171 MobiDBLite consensus disorder prediction 1 34 - -
Sto6g0185 171 MobiDBLite consensus disorder prediction 122 151 - -
Sto6g0185 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 11 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0185 Sto-Chr6 2224520 2225436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0185 24 155 AP2-EREBP Transcription Factor Family AT2G44940 64.179 3.17e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto6g0185 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0185 - - gmx:100776436 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0185 6 2224520 2225436 Sto6g0185 6 2224520 2225436 ECH