Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0184 ATGTTTAGGCGTGCACCAAGGACAAGTGATAACACCAAGTATTATGATATTCTTGGTGTTTCAAAAAGTGCTAGTCAAGATGAGCTCAAGAAGGCCTATAAAAAGTCAGCAATCGTTAATCATCCAGATAAAGGTGGAGACCCTGAGAAGGTAAGGCTGATGGTCACTGCTTCTGTTCTTCACTTTCTCTATACTATATCTCAAAAGTTCAAGGAGTTAGCTCAAGCTTATGAAGTTCTTAGCGATCCTGAAAAGAGAGAATTGTATGATCAATATGGTGAAGATGCCCTTAAAGAAGGAATGGGGGGAGGAGGTGGAGGCCCTTTTCATAGTCCATTTGATATATTTGAATcattttttggtggaggagCGTTTGGTGGAGGAGACTTTGGTGGCAGTAGTTCAGGAAGAAGAAGGCAGAAACATGGTGAAGATGTGGTTCATACTTTGAAGGTTTCTTTGGAGGACGTGTATAATGGCACAACCAAGAAACTATCTCTTTCTAGAAGAGTATTATGCAAAAAATGTAAAGGCAAAGGTTCAAAAAGTGGGACAACTGGTATGTGTTATGGATGCCAAGGCACAGGGATGAAGACTACAATAAGGCAGATTGGACTTGGTATGATTCAACAGATGCAACATGTTTGTCCTGATTGCAGCGGCTCTGGTGAGGTCATTAGTGAGAGAGATAAATGCCCTCAGTGCAAGGGAAACAAGGTCACGCCGGAAAAGAAGGTGATGGAGGTGAATGTAGAGAAAGGCATGCAGCAGGGTCAGAAGATTGTATTTGAGGGACAAGCTGATGAAGCTCCTGACACAATCCCAGGAGACATTGTTTTTGTTGTGCAAGTAAAGGAGCACCCCAAATTCAATAGGAAGGGTGATGACCTCTATGTTGAGCACAACCTCAATTTGACTGAGGCACTGTGTGGGTTTCAATTTGTCCTTACCCATCTTGATGGGAGGCAACTCTTGATCAAATCAAACCCTGGAGAAGTCATCAAGCCTGGTCAATATAAAGCAATAAATGACGAGGGAATGCCCTATCATGGTCGGCCCTTCATGAAGGGCCAACTTTTCATCGAATTTAGTGTCGACTTCCCGGAATCAGGCTTCCTTCCCCCCGACCAATGCCGGATGTTAGAGTCGGTTTTACCTCCGAAGAAGAGCAAGACCTTGACTGGTATGGAGGTGGATGAGTGTGAGGAAACAACTTTGCACGATGTTAACATGGAGGAAGAGGCAAGACGGAGGCGGCAACAACAATTCCATGAGGcttatgatgaagatgaagatgacgaCGACGATGAGGAGGCATCTGGGCCTCGTGTGCAATGTGCTCAACAGTGA 1350 0.4319 MFRRAPRTSDNTKYYDILGVSKSASQDELKKAYKKSAIVNHPDKGGDPEKVRLMVTASVLHFLYTISQKFKELAQAYEVLSDPEKRELYDQYGEDALKEGMGGGGGGPFHSPFDIFESFFGGGAFGGGDFGGSSSGRRRQKHGEDVVHTLKVSLEDVYNGTTKKLSLSRRVLCKKCKGKGSKSGTTGMCYGCQGTGMKTTIRQIGLGMIQQMQHVCPDCSGSGEVISERDKCPQCKGNKVTPEKKVMEVNVEKGMQQGQKIVFEGQADEAPDTIPGDIVFVVQVKEHPKFNRKGDDLYVEHNLNLTEALCGFQFVLTHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPYHGRPFMKGQLFIEFSVDFPESGFLPPDQCRMLESVLPPKKSKTLTGMEVDECEETTLHDVNMEEEARRRRQQQFHEAYDEDEDDDDDEEASGPRVQCAQQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0184 449 CDD DnaJ_C 144 370 - -
Sto6g0184 449 SUPERFAMILY HSP40/DnaJ peptide-binding domain 290 369 IPR008971 GO:0006457|GO:0051082
Sto6g0184 449 SUPERFAMILY Chaperone J-domain 9 128 IPR036869 -
Sto6g0184 449 MobiDBLite consensus disorder prediction 403 449 - -
Sto6g0184 449 ProSiteProfiles dnaJ domain profile. 13 93 IPR001623 -
Sto6g0184 449 SUPERFAMILY HSP40/DnaJ peptide-binding domain 144 288 IPR008971 GO:0006457|GO:0051082
Sto6g0184 449 Gene3D - 173 239 - -
Sto6g0184 449 SMART dnaj_3 12 85 IPR001623 -
Sto6g0184 449 ProSitePatterns Nt-dnaJ domain signature. 70 89 IPR018253 -
Sto6g0184 449 PRINTS DnaJ domain signature 15 33 IPR001623 -
Sto6g0184 449 PRINTS DnaJ domain signature 33 48 IPR001623 -
Sto6g0184 449 PRINTS DnaJ domain signature 65 85 IPR001623 -
Sto6g0184 449 PRINTS DnaJ domain signature 85 104 IPR001623 -
Sto6g0184 449 ProSiteProfiles Zinc finger CR-type profile. 160 244 IPR001305 GO:0031072|GO:0051082
Sto6g0184 449 Gene3D - 288 369 - -
Sto6g0184 449 Gene3D DnaJ domain 10 131 IPR036869 -
Sto6g0184 449 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 170 241 IPR036410 -
Sto6g0184 449 Pfam DnaJ C terminal domain 147 368 IPR002939 -
Sto6g0184 449 CDD DnaJ_zf 189 239 IPR001305 GO:0031072|GO:0051082
Sto6g0184 449 PANTHER CHAPERONE PROTEIN DNAJ A6 7 55 - -
Sto6g0184 449 PANTHER CHAPERONE PROTEIN DNAJ A6 68 449 - -
Sto6g0184 449 MobiDBLite consensus disorder prediction 403 426 - -
Sto6g0184 449 Hamap Chaperone protein DnaJ [dnaJ]. 10 431 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Sto6g0184 449 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 68 449 IPR044713 GO:0006457|GO:0030544
Sto6g0184 449 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 55 IPR044713 GO:0006457|GO:0030544
Sto6g0184 449 Gene3D - 134 287 - -
Sto6g0184 449 CDD DnaJ 14 82 IPR001623 -
Sto6g0184 449 Pfam DnaJ domain 13 90 IPR001623 -
Sto6g0184 449 Pfam DnaJ central domain 173 239 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0184 Sto-Chr6 2197758 2200844 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0184 14 92 C2H2 Transcription Factor Family AT1G74250 40.506 1.06e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0184 K09503 - gmx:100800590 646.351