Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0170 ATGATTTGTCAAAAACCTCAAATTCTGTTTGCAGATATCGATAAAATTCTGAAGCCCAAAATTGAATTCTTTCAGCAACTGGGTTTTGAGGATTCAGAGTTGCACAAGTTTCTTTCGATGCACGCCACTATTTTGACTCATAGTTTGCATAAAACATTGGTCCCCTCTGTAGACACTGTTAGGAAGATTGCTTACAATGAAAAAGATGTCATTCATGTGTTGCTCAGGACTGGCTGGATACTCCCAAAGTGGAAAAGAATTTCATGTAATGTCGCCTTCTTGGAGAGCTGTGGTATTGTGGGGTCTCAGCTTTCAATGTTGCTCAAAGAGCAGTCTCGGATTTTCGTTGCATCGGAGTCTAAGCTCAGAAACCTTGTTTCACGAGCTGTAAACATGGGTTTCGACTTAAATTCAAGAATGTTGGTCCATGCGCTCGAAACAGTCAGTTCTTTGAGCATCAAAACGTTTGAAAGAAAGTTGGAGTTAATTCAGAGTTATGGGTTTTCCATTGATGATAGCAGGCAGATGTTTAGAAGAGCTCCTCTTTTGCTTAGAGTATCTGAGAGGAAACTAATGGTTGGAATGGAAGTCTTCCTTCATACAATTATGCTGCCCAAGTCAGTGCTGGTTCATAGACCTCAAATTTTGATGTATAGCATGGAGGATAGGGTGATTCCTCGATACAAGGTTTTGCAGTTGCTAATATCAGAAAAAGTACTGAAGAAGCATCCAAGTTTCATTAGACTAATAGAATTGCCGGAGGAGAAATTCTTAAATGATTATATTTTCCAATATAGAAATATTGCAGAGGCTTTGTTGGTGGTTTACAAGGGTCACTATCTGGAAGCTGGTTCTACATCATAA 864 0.3924 MICQKPQILFADIDKILKPKIEFFQQLGFEDSELHKFLSMHATILTHSLHKTLVPSVDTVRKIAYNEKDVIHVLLRTGWILPKWKRISCNVAFLESCGIVGSQLSMLLKEQSRIFVASESKLRNLVSRAVNMGFDLNSRMLVHALETVSSLSIKTFERKLELIQSYGFSIDDSRQMFRRAPLLLRVSERKLMVGMEVFLHTIMLPKSVLVHRPQILMYSMEDRVIPRYKVLQLLISEKVLKKHPSFIRLIELPEEKFLNDYIFQYRNIAEALLVVYKGHYLEAGSTS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0170 287 PANTHER EMB|CAB62602.1 2 279 - -
Sto6g0170 287 Pfam mTERF 67 164 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 Pfam mTERF 3 76 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 Pfam mTERF 151 258 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 PANTHER CGI-12 PROTEIN-RELATED 2 279 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 Gene3D Transcription termination factor 3, mitochondrial 1 83 IPR038538 -
Sto6g0170 287 Gene3D Transcription termination factor 3, mitochondrial 84 267 IPR038538 -
Sto6g0170 287 SMART mt_12 139 169 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 SMART mt_12 174 205 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 SMART mt_12 105 135 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Sto6g0170 287 SMART mt_12 206 238 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto6g0170 mTERF 3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0170 K15032 - csin:114301363 296.204