Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0146 atgggaagaagaaatggaggaAGGTCACTGCAAGAAATTCTTTGTCGTCGTCTCGAGACCTGCAAATCCAGGTACTCAACTATTGATGAAATTGTGAACCATCTTCGCTCAAATTACCCTGATTATCAGCGAACAAAGCAGCAAACTTTGACCCGATTTGTTAAAGAAGCTTTGGAATCATCTAAAGGCAACAAGCAGTTGAATAGAAAACCCAATACTCCAATATTGAAGCATGACATCTCagaagatgatgaggatgatgatgaagagggTCGAAGTGTGTCTCGGAAGAGGCGGAAGAAATTGGACAATAGTGAAGAGAGATTGCAAAAAATGGAGAATTTACACCTTAGAAGGCTACAGAGGGATCAAAGCACTCCAGCAACATCTTCTGCTTCAACTTCTAGTCCATCATTGTCGGAGGAGTCGGGGGAGAGTGACGGCGAAGATGGGGCAGTGTCTACTTCATCGGATGCAATTTATGGGGAGAAAGTGGAGCCTGCTTTTGACTTGATGAAGACAATGTTGCGAGCTTCGTATACAGAAACAAAGGATGTGAAGCCTATTGTGGAGGAGAAAAATCTTGAATTGGAGGTCTCCAATAATAGTAAGGCAACTAAGGTTGATGCTGTGAATGGGGGTGGTACTGAGGTGAAGTCGGGCTTGGAATCAAAGAGGCAATTAAAGGGTTCAGTTTCAAATGGTATTGGTGATGTTGAGGTGAAAGGGAAGGATGGACCCAGATTTAAAGATTTGGGTGGGATGAAGGATGTGTTGGAGGAATTGAAGATGGAGGTGATTGTGCCACTTTACCATCCCCAGTTGCCAAGAAGGTTAGGGGTGAGGCCAATGGCGGGGATTTTGTTGCATGGACCTCCCGGGTGTGGGAAAACTAAACTGGCTCATGCTATAGCTAATGAGACTGGTCTTCCATTCTATCAGATATCCGCTACAGAGGTGGTTTCTGGAGTTTCAGGAGCGTCTGAAGAAAATATTAGAGAGCTTTTCTCGAAAGCATACAGGACTGCTCCatcaattgtctttattgatgagaTTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAGTTAATGACTTCTATGGATCAATCGCACAGACTTTTGCAACCAGCTGATAGTTCAGAAAGTTCCAATACCCATCTTGGGTATGTTCTTGTAATTGGAGCTACGAACAGGCCTGATGCAGTAGATCCTGCCCTGAGACGGCCTGGGCGGTTTGATCGGGAAATTGTCCTTGGTATTCCTGATGAATGTGCAAGGGAGCAAATCTTGTCTGTGCTTACTCACaatcttaaacttgatggctcaTTTGATCTTCGAAAAATAGCCAGGTCTACGCCAGGTTTTGTTGGAGCTGATTTGGCAGCTCTAGCTAACAAGGCAGGTAACCTAGCAATGAAGAGAATTATTGATGAAAGGAAACGTGAATTATCCCAAGATCTTTTGGATGAGAATAATGAAGAGTGGTGGAGGGAACCTTGGTTGCCTGAAGAGATGGACAAGCTTGCCATCAAAATGTCTGATTTTGAGGAAGCGGTTAAATTGGTGCAACCTTCATCAAGAAGAGAAGGATTCTCTTCCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGATTTTCTAAGACAAGAGTTTGAGCGTTATATAGTTAAACGTATAAAATATCCAGAGGATTATGAGGGATTTGGGGTGGACCTTGAGACAGGATTTTTGCTTTATGGACCACCAggttgtggtaaaacactgattGCCAAAGCTGTTGCCAATGAGGCAGGAGctaattttattcatatcaagGGTCCTGAACTTTTAAATAAATACGTTGGAGAAAGTGAGCTAGCAGTTCGGACATTGTTTAGTCGTGCAAGGACATGTTCACCTTGCATACTTTTCTTTGATGAGGTGGATGCTTTGACAACCAAACGAGGTAAAGAAGGTGGATGGGTTGTTGAACGACTCTTGAACCAGTTGCTTATTGAATTAGATGGCGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAACAGGCCTGAGGTGATGGACCGTGCTGTCCTTCGACCTGGTAGGTTTGGTAAACTTCTTTATGTTCCTCTACCAAACCCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCTGTTGATGACAGTGTGGATTTGAGTGCCATTGGAAGAATGGAAGCTTGTGAAAACCTCAGTGGCGCAGATCTCTCTGCATTGatgaACGAAGCAGCCATGGCTGCGCTTGAAGAGAAATTGGCATCAACCGTCAGAACCTCTGAAACATTAACCATAAAGGATAGCCATTTTGAGATAGCGCTACGTAAAATCTCTCCGTCAGTATCGGACACGCAAAAACAATACTATCAACGTTTGTCGGACTGTTTTAAAGCAGCATGA 2469 0.4135 MGRRNGGRSLQEILCRRLETCKSRYSTIDEIVNHLRSNYPDYQRTKQQTLTRFVKEALESSKGNKQLNRKPNTPILKHDISEDDEDDDEEGRSVSRKRRKKLDNSEERLQKMENLHLRRLQRDQSTPATSSASTSSPSLSEESGESDGEDGAVSTSSDAIYGEKVEPAFDLMKTMLRASYTETKDVKPIVEEKNLELEVSNNSKATKVDAVNGGGTEVKSGLESKRQLKGSVSNGIGDVEVKGKDGPRFKDLGGMKDVLEELKMEVIVPLYHPQLPRRLGVRPMAGILLHGPPGCGKTKLAHAIANETGLPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSHRLLQPADSSESSNTHLGYVLVIGATNRPDAVDPALRRPGRFDREIVLGIPDECAREQILSVLTHNLKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQDLLDENNEEWWREPWLPEEMDKLAIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDVGGLDFLRQEFERYIVKRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPNPDERGLILKALARKKPVDDSVDLSAIGRMEACENLSGADLSALMNEAAMAALEEKLASTVRTSETLTIKDSHFEIALRKISPSVSDTQKQYYQRLSDCFKAA 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0146 822 Pfam AAA+ lid domain 454 489 IPR041569 -
Sto6g0146 822 Pfam AAA+ lid domain 740 783 IPR041569 -
Sto6g0146 822 ProSitePatterns AAA-protein family signature. 688 706 IPR003960 GO:0005524|GO:0016887
Sto6g0146 822 MobiDBLite consensus disorder prediction 61 159 - -
Sto6g0146 822 CDD AAA 282 430 - -
Sto6g0146 822 Gene3D - 719 798 - -
Sto6g0146 822 SMART AAA_5 584 720 IPR003593 -
Sto6g0146 822 SMART AAA_5 283 433 IPR003593 -
Sto6g0146 822 ProSitePatterns AAA-protein family signature. 401 419 IPR003960 GO:0005524|GO:0016887
Sto6g0146 822 CDD AAA 587 718 - -
Sto6g0146 822 Gene3D - 240 430 IPR027417 -
Sto6g0146 822 MobiDBLite consensus disorder prediction 90 120 - -
Sto6g0146 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 819 IPR027417 -
Sto6g0146 822 Gene3D - 432 540 - -
Sto6g0146 822 MobiDBLite consensus disorder prediction 208 230 - -
Sto6g0146 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 537 IPR027417 -
Sto6g0146 822 Coils Coil 95 115 - -
Sto6g0146 822 PANTHER AAA-FAMILY ATPASE 30 816 - -
Sto6g0146 822 Pfam ATPase family associated with various cellular activities (AAA) 287 429 IPR003959 GO:0005524|GO:0016887
Sto6g0146 822 Pfam ATPase family associated with various cellular activities (AAA) 589 717 IPR003959 GO:0005524|GO:0016887
Sto6g0146 822 MobiDBLite consensus disorder prediction 121 142 - -
Sto6g0146 822 Gene3D - 546 812 IPR027417 -
Sto6g0146 822 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 30 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0146 Sto-Chr6 1795142 1800603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0146 279 820 Calmodulin-binding Proteins AT3G56690 37.563 2.29e-117 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0146 K14571 - gmx:100809594 1152.89