Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0136 ATGGGAGCTACAGTAAGCAAGCTTATGGGTGGGTCAAGTAGTGTTTATGCCTATAAGCGTTTAGAAAAGGCTGTGTTGGGACCAAAAGGTTATGTTCCAATTTGTGTTGGTTTGGATGAAGAGAATTGCATGCGATTTATGGTTCATACTAAAGCTTTTAAGGATGCTAGTTTTTGTGAACTTCTTAGAAAATCAGAAGATGAATATGGATTTCGGAATGAGGGGATTCTCAAGGTTGTATTTGAAGTACAAGATTTTGAAGATTGGATTACCAAAAGATGCATTAAAAAGAAGATTATGAGAGTGAAATCAAGACGATTGCGTCTTCTCAAGAGATCAAGTActataaaagaaaggaagggaGGAGAATTTATGTATCATCGCCCTGCATTTCCACCCCGTTTCACTTATGGTCCAATACCTAAATacagaaacaaaaataaaagctcCCATGGGGATTGGCCGATTGGAATTTCACTATGCAACATTCAACTTGCCAACACCAATGGCGCCCGCATTTCGTCCCCGTTTATATTTATAGTGAAAGGGGGATGCTAA 558 0.3638 MGATVSKLMGGSSSVYAYKRLEKAVLGPKGYVPICVGLDEENCMRFMVHTKAFKDASFCELLRKSEDEYGFRNEGILKVVFEVQDFEDWITKRCIKKKIMRVKSRRLRLLKRSSTIKERKGGEFMYHRPAFPPRFTYGPIPKYRNKNKSSHGDWPIGISLCNIQLANTNGARISSPFIFIVKGGC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0136 185 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 104 IPR003676 GO:0009733
Sto6g0136 185 Pfam Auxin responsive protein 28 90 IPR003676 GO:0009733
Sto6g0136 185 PANTHER SMALL AUXIN-UP RNA-RELATED 5 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0136 Sto-Chr6 1691886 1695157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0136 10 90 Calmodulin-binding Proteins AT2G24400 34.524 2.19e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0136 K14488 - gmx:102666083 114.775