Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0133 ATGCTATCTTCTCCACCTCGCAGCGCAGAAGGTGTTTTGCATTTACTTCCTGACAGTGACAAGTGGCGGAAGGttctgggtactcccacaagggAAGAGATTAAATGCATGAATGCTATCTATACAGAGTTTAAATTCCCTCAGATAAAAGCTCATCCGTGGCACAAGgtGATGCTGGTTATAGCTCTGACCATCCGAAGTATGCCGAGATCGTTGTGGTACGACATGGTGAAACAGAGTATAATGACAACTGCAGAAAATGGGCCACGGGCATTGGAATTATTGGGCTTGGTTGCTGATGAACAGAACCTTCTCTCTAGATCCAAAGTGAATTTGGTCATCACAGACTATTGTATGCCTGGGATGACAGGCTATGAGGTACTTAAGAAAATCAAGGAATCGTCTATCATGAAGGAAGTTCCAGTGGTGATAATGTCATCTGAGAATGTCCCAACTCGGATTAACAAGTATAATTCCGATCCAAAAATTATTAATCATCAAGACATTGCAGTGAGCAGATTTGTTCTCAAAGAACTTGTTGAAGCATTTGCACTTCATATATAA 564 0.3954 MLSSPPRSAEGVLHLLPDSDKWRKVLGTPTREEIKCMNAIYTEFKFPQIKAHPWHKVMLVIALTIRSMPRSLWYDMVKQSIMTTAENGPRALELLGLVADEQNLLSRSKVNLVITDYCMPGMTGYEVLKKIKESSIMKEVPVVIMSSENVPTRINKYNSDPKIINHQDIAVSRFVLKELVEAFALHI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0133 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 77 156 - -
Sto6g0133 187 Gene3D - 64 182 - -
Sto6g0133 187 Pfam Response regulator receiver domain 82 152 IPR001789 GO:0000160
Sto6g0133 187 SUPERFAMILY CheY-like 81 151 IPR011006 -
Sto6g0133 187 ProSiteProfiles Response regulatory domain profile. 58 187 IPR001789 GO:0000160
Sto6g0133 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 77 156 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0133 Sto-Chr6 1662321 1666391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0133 82 156 Response Regulator Gene Family AT3G56380 70.513 1.38e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto6g0133 Response_reg 4.2e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0133 K14492 - gmx:100499827 126.716