Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0080 ATGTTCACGCTCGCAGCCATTGCCGTCGACGTTCACGCCCCTAGCCGTTGCCGTCATCCTCCACACACACTTGCAACCTTCGCCGTTGTGGATTTGGGGAAAGAAACATATGAAACGAAAGAAAGGGCTACGGATGAAAAGAAAGGcgaaagaagaaagaagaagatgaagtcgTTCTTATCTATAGAAAACTTCAAAGGTAATCCCATGGTGAATGACCCACACGTTTCTCCTTTGGAAGCATTGTTAGAAGTCGCACGTGTGGCCTCTCTGAAACTCCATTATCCTCCTCAATCtccaacccctaaccctaaacgacACACAAATCACAAGAGTAGAAGCTTGAAACGCAGTCACGCCACTCTACATGACGAAGATGAGCAAGAATGGGTTCTTGAATTACGACACAACAAGAAGAAGAGATCCAAGaatcatcatcgtcatcataGTGAGGGCCCCACTGCTCACACTACACCCAAGGCCAAGGGTTTACCCGAAGActtgaagaagaagatagaagaAATGGGAGGGTCAGAGGTGAATCTTCTGATCCAAAAGACTCTCTATTACACTGATCTGAGCTTACAGCACAATAGGCTTTCGCTTCCGATGAATCAGATAAGGAAGCTTGATTTCCTGAGGGAGAGTGAGTCGCTTCTACTgaacgagaagaagaagaagggcatCAAGTGTGAAGGGCTCGACGTCTTTTTGGTAGACCCATGTCTTCGTAAGAGAAGCATAGTGTTGGGGAAGTGGAAAATGAACAAGAGCAGTTGCTATATGCTGAGAGGGAGTTGGATCAAAGTGGCTAATGAGAATGGTCTCACTGTCAATGATGTTGTTCAAGTCTGGTCTTTCAGGGTTCAACAACAACTATGTATGGCTCTTGTTAAGCTTACATGA 906 0.4018 MFTLAAIAVDVHAPSRCRHPPHTLATFAVVDLGKETYETKERATDEKKGERRKKKMKSFLSIENFKGNPMVNDPHVSPLEALLEVARVASLKLHYPPQSPTPNPKRHTNHKSRSLKRSHATLHDEDEQEWVLELRHNKKKRSKNHHRHHSEGPTAHTTPKAKGLPEDLKKKIEEMGGSEVNLLIQKTLYYTDLSLQHNRLSLPMNQIRKLDFLRESESLLLNEKKKKGIKCEGLDVFLVDPCLRKRSIVLGKWKMNKSSCYMLRGSWIKVANENGLTVNDVVQVWSFRVQQQLCMALVKLT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0080 301 MobiDBLite consensus disorder prediction 94 126 - -
Sto6g0080 301 MobiDBLite consensus disorder prediction 138 164 - -
Sto6g0080 301 Gene3D - 165 301 IPR015300 -
Sto6g0080 301 CDD B3_DNA 183 282 IPR003340 GO:0003677
Sto6g0080 301 Pfam B3 domain-containing protein At2g31720-like 165 271 IPR005508 GO:0003677
Sto6g0080 301 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 34 300 IPR005508 GO:0003677
Sto6g0080 301 SUPERFAMILY DNA-binding pseudobarrel domain 181 297 IPR015300 -
Sto6g0080 301 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 34 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0080 Sto-Chr6 1131431 1134367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0080 168 297 B3 DNA Binding Superfamily AT1G05930 30.534 8.93e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0080 - - gab:108466121 127.872