Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0072 ATGGACCCTTTCAGAGGACAAGGAGGAATTCAGATGCTCTTAACCGCAGAACAAGAAGCCCAACACATTACCAGTGGGAACTCTGGATCTAATGTAAAAAGGCTTGAAGAGGAGACAGAAACTAAGATTAATAATCTGAAAGGATCGGCTTCAAAGGTTTCCacagaaattgttgatatgttaCTCAAGCATGTTACTTCTATCAAAGTCTAA 213 0.3709 MDPFRGQGGIQMLLTAEQEAQHITSGNSGSNVKRLEEETETKINNLKGSASKVSTEIVDMLLKHVTSIKV 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0072 70 Gene3D - 22 70 - -
Sto6g0072 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 24 69 IPR005124 GO:0016471|GO:0046961|GO:1902600
Sto6g0072 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 25 IPR005124 GO:0016471|GO:0046961|GO:1902600
Sto6g0072 70 Pfam Vacuolar (H+)-ATPase G subunit 25 69 IPR005124 GO:0016471|GO:0046961|GO:1902600
Sto6g0072 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 25 - -
Sto6g0072 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 24 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0072 Sto-Chr6 1046024 1048268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0072 1 69 Primary Pumps ATPases(2) AT3G01390 42.202 1.13e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0072 K02152 - gmx:100818549 93.2041