Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto6g0055 | ATGGCACATGATCAAGTTCTATCAGATCAAGATAGTGAAGATGAAGTCGATGATGATGTTGCAGATTTTGAAGATCGAAGGATGCTTGATAATTTTGTTGATGTGAACAAAGATGAGAAGCAAATCATGCATATGTGGAACTCATTTGTTCGGAAGCAGCGTGTTCTGGCAGATAGCCATATCCCATGGGCATGTGAGGCTTTTTCAAAATTGCATGCTCCTGACCTTGTCCGATCCCCCGCACTAGCCTGGTTTCGTCATTCCTTTCCTGATCTTCTAAGATGGAAGCAATTTACTGTCAATTTGCTTCTACATGAGTATTTGTATGTTATTGATCAGCTTGTATTTGAAATCCTGCCGATTTATCTTATGAAATag | 378 | 0.3942 | MAHDQVLSDQDSEDEVDDDVADFEDRRMLDNFVDVNKDEKQIMHMWNSFVRKQRVLADSHIPWACEAFSKLHAPDLVRSPALAWFRHSFPDLLRWKQFTVNLLLHEYLYVIDQLVFEILPIYLMK | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto6g0055 | 125 | Pfam | VEFS-Box of polycomb protein | 1 | 85 | IPR019135 | - | |
| Sto6g0055 | 125 | PANTHER | POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED | 1 | 106 | - | - | |
| Sto6g0055 | 125 | PANTHER | POLYCOMB GROUP PROTEIN | 1 | 106 | - | - | |
| Sto6g0055 | 125 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto6g0055 | Sto-Chr6 | 826233 | 828035 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto6g0055 | 1 | 108 | C2H2 Transcription Factor Family | AT5G51230 | 70.370 | 3.73e-36 | 128 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto6g0055 | - | - | zju:107432746 | 135.191 |