Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0045 ATGTTTCTTGTGTGTGATGGAAACGATAATGCGTCAAGTGCATGGGCGTTCCTTGAGGTGGTCCTGGAAGTGGATGCAATTGATGACGGTGTTTTCGGAATTACCATGACAATGGTCAGAATCCTGACGATGCATCAGTATAAAGAGAACAATGCTGGAAATGCAGTTGTTGCTCTTATGGCTCGTTTTGCTCCAAAAGCAAAGGTACTTCGTAATGGAAAATGGAGCGAAGAAGATGCTTCAGAGTTAGTTCCAGGAGACATAATTAGCATCAAGCTAGGTGATATTATTCCTGTTGATGCACGTCTTCTTGAAAGAGATCCTTTGAAAATTGATCAATCTGCTCTTACTGGAGAGTCACTTCCAGTGACAAAAAATCCTAGAGATGGAGTATACTCTGGCTCAACATGCAAGCAATGTGAAATTGAAGCTATAGTTATTGCAACTGGAGTTCACACTTTCTTTGGGAAGGCAGCTCATCTTGTGGAAAACACAACACATGTTGGCCATTTTCAGAAGGTTTTAATAGCTATTGGGAATTTTTCAATTGCTGTGGGAATGGTTATTGAGATCATAGCGATGTATGGGATTCAAAAAAGGGAATACAAAGTTGGTATTGATAACCTCCTCGTGCTACTTATTGGAGGCATCCCTATTGCTATGCCAACTATTCTTTTTGTTATAATGGCTATCGGCTCGCATCAGTTGTCTCAACAGGGTGCCATAACAAAGAGAATGACAGCAATTGAAGAAATGGCTAGAATGGATGTGTTATGTAGTGACAAAACATGCACATTGACTTTTAACAAGCTTACAGTGAACAAGAATATGATTGAAGTATTTACAAAAGGTGTGGACAAGGATTCAATTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAATCAGGATGCAATTGATGGTGCAATTGTTTCAATGTTGGTTGACCCAAAGGAGGCACGAGCTAGAATAAAAGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACATTGATGTTGCTGGTAAGATGCACAGAGTTAGCAAAGGTGCACCTGAGCAGATCCTAAATCTTGCACATAACAAATCAGAAATAGAAGGAAAGGTACATGCAATCATCGACAAGTTCGCAGAACGAGGGCTTCAATCTCTTGCAGTTGCTCGCCAGGAAGTACCTCAAGGAACAAAAGATAGTCCAGGAGGCCCTTGGCAATTTATTGGTCTTCTCCCTCTGTTTGACCCTCCTCGCCATGATAGTGCAGAAACAATCAGAAGAGCTTTGAATCTAGGAGTGAGTGTCAAAATGATCACTGgtgatcaacttggaattGCTATAGAAACTGGAAGGCGTCTAGGAATGGGCACTAATATGTAtccttcttcatctcttctTGGTGTAAAGAAAGATGAAGAAGTTGCTGCTCTCCCCATTGATGAGCTCATTGAGCATGCCGATGGTTTTGCCGATGTCTTTCCCAGTTTCATGTTACTGGCTTGCTTTTGGGAATTTCACTTTCCTCCCTTCATAGTTCTTGTCATTGCAATTCTCAATGATGCTTCTGCATTAATTCACCATTTGTCTTGTCCCTTTACTGGTTGGCATCCTTGTAGGTACCATCATGCAATTTCAAAAGATAGGGTCAAACCTTCTCCAATTCCTGATAGTTGGAAGCTAAGTGAAATTTTTGCCACTGGCATTCTTGCTCTAATGACAGTCATATTCTTCTGGGCAGCATATGAAACTAACTTCTTTCCTGACCATTTTAATGTGAGAAACTTCAATTCACACAGTCATAACATGTTGAATATTACTGTCTCTACTGAGCTGAAAGAGATGCTGGGATCCGCTGTGCCTGGCCTTTTGCTTGTTATTGCCTTCATTGTTGCTCAGCTGATTGCAACCATTATATCTGCCACCGTCACTTGGAAAACTGCAGGAATCAGAAGCATAGGTTGGGGTTGGACTGGAGTGATTTGGTTGTTCAACATTGTGACTTACGTATTTTTGGATCCTTCAAAATTTGTGATTCGATATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTAGATCAAAGAACTGCATTCAACAACAAGAATGACTTTGGTAGAGAAGCTCGAGAGGCAGCATGGGCTGCTGAACAGAGAACCCTACATGGCCTCCAATCTGCTGAGACAAAGATGTTCTCAGAGAAGCATACATTCAGGGAAATAGGCGTAGTGGCAGAAGAGGCTAAGAAGCAAGCAGAGATAGCAAGGTTGAGAGAGCTCCACACTCTTAAAGGAAAAGTGGAATCATTTGCTAAGCTAAGGGGTTTGGACATTGATGCTATCAACGGGCACTACACTGTCTAA 2370 0.4097 MFLVCDGNDNASSAWAFLEVVLEVDAIDDGVFGITMTMVRILTMHQYKENNAGNAVVALMARFAPKAKVLRNGKWSEEDASELVPGDIISIKLGDIIPVDARLLERDPLKIDQSALTGESLPVTKNPRDGVYSGSTCKQCEIEAIVIATGVHTFFGKAAHLVENTTHVGHFQKVLIAIGNFSIAVGMVIEIIAMYGIQKREYKVGIDNLLVLLIGGIPIAMPTILFVIMAIGSHQLSQQGAITKRMTAIEEMARMDVLCSDKTCTLTFNKLTVNKNMIEVFTKGVDKDSIVLMAARASRLENQDAIDGAIVSMLVDPKEARARIKEVHFLPFNPTDKRTALTYIDVAGKMHRVSKGAPEQILNLAHNKSEIEGKVHAIIDKFAERGLQSLAVARQEVPQGTKDSPGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLGIAIETGRRLGMGTNMYPSSSLLGVKKDEEVAALPIDELIEHADGFADVFPSFMLLACFWEFHFPPFIVLVIAILNDASALIHHLSCPFTGWHPCRYHHAISKDRVKPSPIPDSWKLSEIFATGILALMTVIFFWAAYETNFFPDHFNVRNFNSHSHNMLNITVSTELKEMLGSAVPGLLLVIAFIVAQLIATIISATVTWKTAGIRSIGWGWTGVIWLFNIVTYVFLDPSKFVIRYALSGRAWNLVVDQRTAFNNKNDFGREAREAAWAAEQRTLHGLQSAETKMFSEKHTFREIGVVAEEAKKQAEIARLRELHTLKGKVESFAKLRGLDIDAINGHYTV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0045 789 SUPERFAMILY HAD-like 410 463 IPR036412 -
Sto6g0045 789 SUPERFAMILY Calcium ATPase, transmembrane domain M 35 686 IPR023298 -
Sto6g0045 789 Pfam E1-E2 ATPase 64 238 - -
Sto6g0045 789 Gene3D - 256 495 IPR023214 -
Sto6g0045 789 PANTHER PLASMA MEMBRANE ATPASE 31 499 - -
Sto6g0045 789 PANTHER PLASMA MEMBRANE ATPASE 624 769 - -
Sto6g0045 789 PANTHER PLASMA MEMBRANE ATPASE 500 623 - -
Sto6g0045 789 PRINTS H+-transporting ATPase (proton pump) signature 375 393 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g0045 789 PRINTS H+-transporting ATPase (proton pump) signature 490 506 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g0045 789 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 42 280 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g0045 789 PANTHER CALCIUM-TRANSPORTING ATPASE 624 769 - -
Sto6g0045 789 PANTHER CALCIUM-TRANSPORTING ATPASE 31 499 - -
Sto6g0045 789 PANTHER CALCIUM-TRANSPORTING ATPASE 500 623 - -
Sto6g0045 789 SUPERFAMILY Calcium ATPase, transduction domain A 65 162 IPR008250 -
Sto6g0045 789 Gene3D - 738 789 - -
Sto6g0045 789 Gene3D - 496 685 - -
Sto6g0045 789 Gene3D - 33 255 - -
Sto6g0045 789 Gene3D - 271 418 IPR023299 GO:0000166
Sto6g0045 789 Gene3D - 65 149 - -
Sto6g0045 789 PRINTS P-type cation-transporting ATPase superfamily signature 112 126 - -
Sto6g0045 789 PRINTS P-type cation-transporting ATPase superfamily signature 259 273 - -
Sto6g0045 789 PRINTS P-type cation-transporting ATPase superfamily signature 413 424 - -
Sto6g0045 789 PRINTS P-type cation-transporting ATPase superfamily signature 435 445 - -
Sto6g0045 789 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 265 424 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0045 Sto-Chr6 687268 696051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0045 500 789 Primary Pumps ATPases AT5G62670 53.698 3.87e-100 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0045 K01535 - rcu:8265793 773.081