Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4422 ATGGCATCGTCATCAAGCAGTGGGTTGACATTCAAGCTACATCCCTTGGTGATAGTTAACATATCGGATCATTATACTCGAGTCAAGTCACAGATGAACCCACCTATTGCAGCTCATCATAGAAGCGCCACCTCCCCGAGAGTGTATGGATGCGTGATAGGGATACAGAGGGGACGCACTGTGGAGATCTTCAATAGCTTCGAACTTCTCTACGATCCTTCTACACATTCCCTGGATCGTTCTTTTCTGGAGAAGAAGCAAGAGCTCTACAAGAAAGTTTTTCCCCACTTTTATATACTCGGATGGTATTCGACTGGGAACGATGCTCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATaaatgaaagtccagtttatgtACTTCTCAATCCTTCAATCAATCATGCTCAGAAAGATCTCCCCGTCAGTATTTATGAAAGTGAGCTGCATGTAATAGATGGGATTCCGCAACTTATCTTTGTTCGCTCAAGCTACACTATTGAGACTGTTGAAGCAGAGCGAATTTCAGTTGATCATGTTGCACATCTTAAGCCATCAGATGGTGGTTCAGCAGCTACACAGTGTGAGTGTTTTTCAGTTGACTCTTGccatatttattTGGCTGCTCACCTTACTGGTATACATAGTGCTATCAAAATGCTGCATAGCAGAATAAAGGTGCTGCACCATTATCTTCTTGCAATGCAGAAAGGTGATgtaccttgtgacaattctctGTTAAGACAAGTATCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGTAAATTCCAAGATGATTTCTTAATGGAATACAATGATACCTTATTGATTACTTATCTTGCCATGATGACCAACTGCTCAAGTGCAATGAATGAACTGGTCGACAAATTCAATACTGCATATGACAGACATAGCAGGAGGGGCGGACGAACTGCTTTTATGTGA 960 0.399 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPIAAHHRSATSPRVYGCVIGIQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGNDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIYESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQCECFSVDSCHIYLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCDNSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMMTNCSSAMNELVDKFNTAYDRHSRRGGRTAFM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4422 319 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 7 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g4422 319 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 2 319 - -
Sto5g4422 319 ProSiteProfiles MPN domain profile. 11 154 IPR037518 -
Sto5g4422 319 SMART pad1_6 10 153 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g4422 319 Pfam Maintenance of mitochondrial structure and function 174 300 IPR024969 -
Sto5g4422 319 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 6A 2 319 - -
Sto5g4422 319 CDD MPN_CSN6 9 315 IPR033859 GO:0000338|GO:0008180
Sto5g4422 319 Gene3D Cytidine Deaminase, domain 2 1 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4422 2 305 Eukaryotic Initiation Factors Gene Family AT2G39990 24.595 9.52e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4422 K12179 - gmx:100797079 560.836