Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4415 ATGGCTGGGATTGATGACAATGTTTCCCTCACTAGCGACTGGGGTCATCCTAGTCCAAGTCCAAGAACCTTTTTCTCTAGAGTGTTAGGTGAAGATAACTTCACAAGACCCGTCTCAGAGCCTCCTGGAAGTGCTAGAACTGAGGAGTCCTTTCTGGAAACTCAAGAGCACATTATGACCAGAAAATTTAACATAAAAGATACTGCGCAAGATGATGATGCATCCGGTGGCCAATTAACTGACACAAATCCTTTGTCTGAGCACAAGTCAAGCGCACGAGGAGGTCTTGTCGAAAGAATGGCTGCTCGAGCGGGATTTAATGCCCCAAGGTTGAATACTGAAAGCATTAGATCAGCTGACCTAACACTTAATTCTGACTCTCGATCTCCTTACTTAACCATACCACCAGGCCTCAGTCCAACTACACTTCTAGATTCTCCAGTGTTCCTTTCAAATTCACTGGCACAACCATCTCCAACAACTGGAAAGTTTCCATTTATCTCAGGTGGCAACTTCCGGTGCTTGGAATCAAACTCTGGTGCTCCTGAAAAAACTAAAGATAACGACTTTGATGACATCTATTCATCATCGTTTGCTTTCAGGACTACAACAGATTTGGGGTCTTTCTTTCATGGTGCTACTGGAAAAATGAATTCAACTACGCTGCCTGAACAATATCTTACCGGTACTGAGGTTTCAGCTCAATCGAAGAATTCTTTTCAATCTCTTTGTGTTGATGCAGTCAAAGTTCAAAGTGAGAATAAAAGTAGCCTTCATCTTCAGGCTGACTTTATTGACTCGCCAACTCAAAATGATAATAAAACAGCACTTGAGGAACAAGCAGATGAAGAGGGTGATCAAAGAGGAAATGGAGACTCAATGGCTGCTGGTGTTGGTGGCACGCCATCTGAAGATGGATATAACTGGAGAAAATACGGACAAAAACAAGTCAAAGGTAGTGAATATCCACGAAGTTATTACAAATGTACGCATCCAAACTGTCAGGTTAAAAAGAAAGTAGAACGATCCCATGAGGGCCATATAACGGAAATCATTTACAAGGGGAATCACAACCATTCAAAACCTCCAAATCGCAGATCAGCAATAGGGTCAGTTAACCCTCTTGGTGACATGCAATTAGACATGTCTGAAAGTGTTGAACCACAgggtggtggtgatggtgaACTGGGGTGGACAAGTGCACAAAAGGGAAATATAACTAAAGCTGCTGATTGGAAGCATGAAAACCTTGAGGTGACCTCATCAGCAGCATCTTTGGGCCCTGAAATCTGTAGCCAATCCACTAATTTGCAGGGTCAAAATGGTACTCACATTGAATCAGGAGATGCGGTGGATGCCTCATCTACTTTCTCTAATGACGAGGATGAGGATGATAGGGCCACTCATGGTAGTatatcattaggatatgatggGGAAGGAGATGAGTCAGAGTCTAAAAGAAGGAAACTGGAATCTTATGCAAATGCAACAGAATTGAGTGGAGCCACTAGAGCTATTCGTGAGCCTAGAGTTGTTGTCCAGACTACCAGCGAAGTAGATATCCTGGATGATGGATATCGTTGGCGAAAGTATGGACAAAAAGTTGTAAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTGAAATCCGTGATCACTACATATGAGGGAAAGCACAATCACGACGTTCCTGCTGCTCGCAATAGCAGTAATCAAGTCAATGCTGCCACTTCTAGCACTCTTCCTCCTCAAAATCACAGAGCTGAACCATCACATTCACACGCTCACAATAGCATTGGAAGGCTTGAGAGGCCTTCCCTGGGTCTGGGCTCATTCAACCTACATGGGCCTGGGAGGCCGCATCAACAACAACAGCTTGGGCCTCCCCATGCCTTCTCCTTTGGAATTGGAATGAATCAACCCATGCAAGCCTTCCCCAACCTAGCTGCATTGGGCCCTACCCATGCAAAGCTTCCTGTCATGCCTGTTCACCCATTCTTGCCACATCAACGTCCACCAAATGAAATGGGCTTTATCTTGCCTAAAGGAGAACCCAATTTGGACCCTATTCCAAACCGCGCCCATAACTTGCCGGCTGCTTCATCGGTGTATCAAGAAATTATGAGTCGGATGCCCCTTGGACCTCACATGTAA 2208 0.4407 MAGIDDNVSLTSDWGHPSPSPRTFFSRVLGEDNFTRPVSEPPGSARTEESFLETQEHIMTRKFNIKDTAQDDDASGGQLTDTNPLSEHKSSARGGLVERMAARAGFNAPRLNTESIRSADLTLNSDSRSPYLTIPPGLSPTTLLDSPVFLSNSLAQPSPTTGKFPFISGGNFRCLESNSGAPEKTKDNDFDDIYSSSFAFRTTTDLGSFFHGATGKMNSTTLPEQYLTGTEVSAQSKNSFQSLCVDAVKVQSENKSSLHLQADFIDSPTQNDNKTALEEQADEEGDQRGNGDSMAAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGNHNHSKPPNRRSAIGSVNPLGDMQLDMSESVEPQGGGDGELGWTSAQKGNITKAADWKHENLEVTSSAASLGPEICSQSTNLQGQNGTHIESGDAVDASSTFSNDEDEDDRATHGSISLGYDGEGDESESKRRKLESYANATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSNQVNAATSSTLPPQNHRAEPSHSHAHNSIGRLERPSLGLGSFNLHGPGRPHQQQQLGPPHAFSFGIGMNQPMQAFPNLAALGPTHAKLPVMPVHPFLPHQRPPNEMGFILPKGEPNLDPIPNRAHNLPAASSVYQEIMSRMPLGPHM 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4415 735 MobiDBLite consensus disorder prediction 582 605 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 260 310 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 71 89 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 1 25 - -
Sto5g4415 735 SUPERFAMILY WRKY DNA-binding domain 514 582 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 Pfam WRKY DNA -binding domain 523 579 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 Pfam WRKY DNA -binding domain 304 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 ProSiteProfiles WRKY domain profile. 517 582 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 95 614 - -
Sto5g4415 735 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 95 614 IPR044810 GO:0003700
Sto5g4415 735 MobiDBLite consensus disorder prediction 432 487 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 67 93 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 432 455 - -
Sto5g4415 735 MobiDBLite consensus disorder prediction 260 275 - -
Sto5g4415 735 SUPERFAMILY WRKY DNA-binding domain 301 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 SMART WRKY_cls 522 581 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 SMART WRKY_cls 303 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 Gene3D WRKY domain 509 575 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 Gene3D WRKY domain 294 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g4415 735 MobiDBLite consensus disorder prediction 577 644 - -
Sto5g4415 735 ProSiteProfiles WRKY domain profile. 304 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4415 Sto-Chr5 52628352 52631846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4415 1 730 WRKY Transcription Factor Family AT5G56270 48.497 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto5g4415 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4415 K18835 - gmx:100796545 1010.36