Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4410 ATGGCTGACGAAACACAAAACGATATGAAGGAGGAGGTTCCAGAAATTGCCCCATTTGATCCtactaagaagaagaagaagaagaaaattacaATTATAGATCCTGCTGATGATTCTGTGGACAACTTGACTGAGAAGACAGAAACCTTGTCAGATATCTTTTCACTTGCAGTTTCGGAAGGGCTTGAGACTACATTTTCTggtttaaaaaagaagaagaagaagccaGTTGAGACCAGTAACTTGAATGATGAGGGTGGAGATGCAGCCGAAGATTTGGATGGCTTAGATCACTCTGGGGAGGATGAAGGAGAAGGTGAGACTCTGTTGCCTCGTTATCCTTGGGAAGGAAGTGACCGAGACTATGAATACGAGGagCTTCTGGGCAGGGTCTTTAACATTTTACGTGAGAATAATCCAGAACTTGCTGGAGATCGGAGGAGGACAGTTATGAGGCCTCCACAAGTTCTTCGAGAGGGCACAAAGAAAACTGTTTTTGTGAACTTTATGGATTTATGCAAAACGATGCATCGACAGCCAGATCATGTCATGGCTTTTTTGCTTGCTGAGCTGGGTACAAGTGGTTCACTGGATGGACAGCAAAGATTGGTTGTGAAAGGAAGATTTGCACCAAAGAACTTTGAAGGAATTTTAAGGCGATATATCAATGAATATGTCATTTGCCTTGGATGCAAGAGTCCAGACACCATACTTTCAAAGGAGAATCGTCTGTTCTTTCTCCGATGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCTGGGACATGA 831 0.4103 MADETQNDMKEEVPEIAPFDPTKKKKKKKITIIDPADDSVDNLTEKTETLSDIFSLAVSEGLETTFSGLKKKKKKPVETSNLNDEGGDAAEDLDGLDHSGEDEGEGETLLPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4410 276 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 225 260 IPR016190 GO:0003743|GO:0006413
Sto5g4410 276 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 276 - -
Sto5g4410 276 SMART eIF2Bneu4 146 255 IPR002735 GO:0003743|GO:0006413
Sto5g4410 276 MobiDBLite consensus disorder prediction 70 114 - -
Sto5g4410 276 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 121 228 IPR016189 GO:0003743|GO:0006413
Sto5g4410 276 Pfam Domain found in IF2B/IF5 145 254 IPR002735 GO:0003743|GO:0006413
Sto5g4410 276 MobiDBLite consensus disorder prediction 85 101 - -
Sto5g4410 276 MobiDBLite consensus disorder prediction 1 22 - -
Sto5g4410 276 MobiDBLite consensus disorder prediction 1 28 - -
Sto5g4410 276 Gene3D - 119 261 - -
Sto5g4410 276 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 276 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4410 Sto-Chr5 52592870 52596611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4410 1 272 Eukaryotic Initiation Factors Gene Family AT5G20920 75.092 3.09e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4410 K03238 - gmx:100783618 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4410 5 52592870 52596611 Sto5g4410 5 52592870 52596611 ECH