Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4397 ATGTATTCCAAGAAAGATAAGAAGGAGGCTGCTACGGCAGTTCATTACTACGTGGAGACCGACCCAACTGCTCGCTATGGTCGATTTGGAGAAATTCTTGGAAAGGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTTGTTGGAATAGAGGTAGCATGGAACCGGGTCGAAGTCAATAAGGCACTCTCCACACCAGATGATTTGCAGCGACTTTACTCAGAGGTTCATCTCCTCAGAACTCTCAAGCATCAGTGCATTATTCGATTCTATACCTCTTGGATTGATGTTGATCACAAGACCTTCAACTTCATTACGGAAATGTTCACTTCAGGGACACTCAGAGAATACCGGAAGAAATATAAGCGAGTTGGCATAAATGCAATAAAAAGCTGGGCTCGTCAAATCTTGCAAGGTCTTGTTTATCTACATGGCCATGACCCTCCAGTAATTCACAGGGACCTTAAATGTGATAATGTATTTATCAATGGCCATCTTGGGCAAGTCAAGATTGGCGATCTGGGACTAGCAGCTATTCTCCGTGGTTCCCAGTCAGCCCACAGCGTTATAGGCACCCCAGAGTTCATGGCACCGGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGAGTACCCTTATAGTGAATGTGCTAACCCTGCACAGATCTACAAGAAAGTGACATCGGGGAAACTACCAAGAGCTTTTTTCCGGATTGAAGATTTAGAAGCACAAAAATTCGTTGGAAAATGCCTAGTAACTGCCACAAAGAGACCATCAGCGGCTGAATTGTTGCATGACCCGTTTCTTGTGACTGGTGATGATGCattgtcaatttcaaaatttggaaTTCAGATGCCATTTTTGAATGACAGTAAGATGGAAAATCTGCAATTGAATGACGAGTCACCCAGGACTGAAATGACAATCACAGGGAAGCTGAATTCTGAGGATGATACTATCTTTCTCAAAGTGCAAATTGCTGAGATGGAAGATTCTGTTAGGAACGTATATTTCCCGTTTGATGTTTTCACTGACACCCCCATTGATGTTGCAATAGAGATGGTAAGGGAGTTGGAGATAAATGATTGGGAGCCATCTGAAATTGCAAATATGATTGAAGGAGAGATATCTGCTCTACTGCCACATGGGAGGAAAGGGGACTGCTTTGATTCCTGTCATTTGTTTAGTTATCGAGATGACTATGACATTGGATCTCATCCTCATTTCCGCTCATTGTCTTCTTGTTCATCATCCCAAGAATCAATATCAGGCTTAGTCGCAAAAACTGAGAAAATGACCAATGGATATTATTGGCCACATGTGGCAGCCTTTGTTGGTAATTACTTAGCTGGGTTTGTAGGGTATTGCTGGAAAAACAGTGCCCTTGGAGGAGACATAAGTGCTTCTTATGATGTTCTTGATGATACCAGTTCACAATGCTCATCACAAGGGACATATTCCAACTTGAATTATTGTTCTGTAGATGAGCAGGAGCACAATCTGGCTTCTACAAGAAAAGATAAGCATCTCATCACCAAGAGTCACAAGTGTACAAGGTTTTCCCTTGGTGAAGACCTAGGAACTGGGTCGTCTATGTCTACAAATTGTTGCAACCTAGGACCACAAGCAGCTTCTACCAGCATAAATAAGAGAATGATGGACAATCGAAGATTGACACGAAACAGGTCACTAATTGATGTTCATAGCCAGCTACTACACCGATCGCTGATCGAGGAGGTAAATAAGAGACGGCTATTCAACACAGTAGGAGCTGTAGAAAATGTTGGATTTCAGACACCTTGTGAGGTTTCCCAGAAAAAGCTACTGCAGCCAGAATGCGGAGATGTGGATGTGAACCCTTCAAGGATGAAGAGTTCAAAgccataa 1935 0.4186 MYSKKDKKEAATAVHYYVETDPTARYGRFGEILGKGAMKTVYKAIDEVVGIEVAWNRVEVNKALSTPDDLQRLYSEVHLLRTLKHQCIIRFYTSWIDVDHKTFNFITEMFTSGTLREYRKKYKRVGINAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNVFINGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPRAFFRIEDLEAQKFVGKCLVTATKRPSAAELLHDPFLVTGDDALSISKFGIQMPFLNDSKMENLQLNDESPRTEMTITGKLNSEDDTIFLKVQIAEMEDSVRNVYFPFDVFTDTPIDVAIEMVRELEINDWEPSEIANMIEGEISALLPHGRKGDCFDSCHLFSYRDDYDIGSHPHFRSLSSCSSSQESISGLVAKTEKMTNGYYWPHVAAFVGNYLAGFVGYCWKNSALGGDISASYDVLDDTSSQCSSQGTYSNLNYCSVDEQEHNLASTRKDKHLITKSHKCTRFSLGEDLGTGSSMSTNCCNLGPQAASTSINKRMMDNRRLTRNRSLIDVHSQLLHRSLIEEVNKRRLFNTVGAVENVGFQTPCEVSQKKLLQPECGDVDVNPSRMKSSKP 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4397 644 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 629 - -
Sto5g4397 644 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4397 644 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Sto5g4397 644 SUPERFAMILY Protein kinase-like (PK-like) 29 317 IPR011009 -
Sto5g4397 644 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4397 644 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 3 629 - -
Sto5g4397 644 CDD STKc_WNK 25 285 - -
Sto5g4397 644 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4397 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Sto5g4397 644 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4397 Sto-Chr5 52519180 52524017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4397 17 622 MAP Kinase Kinase Kinase AT5G58350 55.993 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto5g4397 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4397 K08867 - gmx:100778102 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2278 9 26173633 26176707 Sto5g4397 5 52519180 52524017 CCT
Sto5g4397 5 52519180 52524017 Sto5g4397 5 52519180 52524017 ECH