Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4396 ATGGGTAATCACAGGTTCAAATTGTCTGACATGATTCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGGAAGAGGAATGGTTTTCATGCTATGAAGAACAAGCCAAGCTCACCAACCACATCCCAAAGATCGCAGGCAAGGTATTCGAATTATTTCCCCACTGAACCAAATAGAGCCGGTAAGTTATACAACTCACCCATTTTCACCAAAGGCTCACAACAACACATCCCATCATCCATTGATTCACCAAGAAGGTCTTCCAAGAGGAGGTCCAGGAGGAAAACCATTTACTACAAGCCTTCTTCTCCCACACTTGTTTCTTCCTCTTCTGAGTGTGATGATAGCTCTGCTGCTCCTGATTTTTTTAATGGGTTACCCTCAAATTGCAGTTGTAGAGTTAGTTCTTCCACTAATGATATCATCATCGACATGAACAATGGAGTGCCCTTCACAGGGAATTCTGAAAAGCTAGATGGTTTTGAAACAATCTCAGAGTTAGATCTTCCTCCAATTTTAACAAAGCCATTGAAGTTTGATGAGAAGTCCAAGTTGGATAAGCTGAAGGATCATCACCAGTCTGTATCTGTGAAGAATAGCAAGAAGGAGAGTTCAGAATCAGAAGAGTTGAATAAAAcacaaagagagagaaaatccAGTGCTATTGCTAGAAAGTCATCTGCTGGTTCTACAGGCATAAGACTTAGGGTGAATTCTCCAAAACTAGCAAGCAGGAAAGTTCAAGGCTTTGCTGCAAGAAGAGGGGCTTCTTCAAGGAACACAGGATTTCCAGAGGGTTTTGCAGTTGTGAAATCCTCATTTGATCCACAAAGAGACTTCAGGGATTCAATGGTGGAGATGATTATGGAGAACAATATCAGGTCATCAAAGGATTTGGAGGATCTACTTGCATGCTATCTTTCACTAAACTCAAGTGAATACCATGAACTCATTGTCAAAGCATTTGAGCAAATTTGGTTTGACATGGCTCAACTCAAATTGTAA 1014 0.3984 MGNHRFKLSDMIPNAWFYKLKDMSRSRKRNGFHAMKNKPSSPTTSQRSQARYSNYFPTEPNRAGKLYNSPIFTKGSQQHIPSSIDSPRRSSKRRSRRKTIYYKPSSPTLVSSSSECDDSSAAPDFFNGLPSNCSCRVSSSTNDIIIDMNNGVPFTGNSEKLDGFETISELDLPPILTKPLKFDEKSKLDKLKDHHQSVSVKNSKKESSESEELNKTQRERKSSAIARKSSAGSTGIRLRVNSPKLASRKVQGFAARRGASSRNTGFPEGFAVVKSSFDPQRDFRDSMVEMIMENNIRSSKDLEDLLACYLSLNSSEYHELIVKAFEQIWFDMAQLKL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4396 337 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 270 332 IPR006458 -
Sto5g4396 337 MobiDBLite consensus disorder prediction 188 233 - -
Sto5g4396 337 MobiDBLite consensus disorder prediction 70 85 - -
Sto5g4396 337 ProSiteProfiles OVATE domain profile. 272 331 IPR006458 -
Sto5g4396 337 MobiDBLite consensus disorder prediction 31 114 - -
Sto5g4396 337 MobiDBLite consensus disorder prediction 188 225 - -
Sto5g4396 337 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Sto5g4396 337 Pfam Transcriptional repressor, ovate 276 332 IPR006458 -
Sto5g4396 337 MobiDBLite consensus disorder prediction 36 56 - -
Sto5g4396 337 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 336 - -
Sto5g4396 337 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 336 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4396 Sto-Chr5 52515356 52516543 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto5g4396 Ovate 5.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4396 - - gmx:100798120 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2277 9 26169925 26171022 Sto5g4396 5 52515356 52516543 CCT
Sto5g4396 5 52515356 52516543 Sto5g4396 5 52515356 52516543 ECH