Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4394 ATGGAGGAGAATAATAATGCCTTGTTTGGGAAATACGAGCTGGGAAGGCTTCTAGGTTGTGGAGCATTCGCGAAGGTCTACCATGGCCGCAACCTCCAAACCTCCCAAAATGTCGCCGTCAAGATCATCAGCAAGAAGAAGATTACCTCCTCTGGCCTCACCTCCAACGTCAAGCGCGAGATCACCATCATGAGCCAACTCCACCACTCCCACATCGTCAAGCTCCACGAGGTCCTCGCCACCAAGACCAAAATCTTCTTCATCCTTGACTTCGTCAAAGGCGGCGAGTTATTCACCAAAATCGCCAAGGGCCGTTTCACCGAGGATCTCACCCGTAAATACTTCCACCAATTAATCTCCGCCGTCCGATACTGCCACTCCCGCGGCGTCTACCACCGCGATCTCAAACCCGAGAATCTCCTCGTCGACGACAACGGCACCCTCAAGGTTTCCGACTTCGGCCTCAGCGCCGTCACCGATCAGATCCGACCCGACGGCTTGCTCCACACGCTCTGCGGCACGCCCGCCTACGTCGCGCCGGAGATTCTCGCCAAGAAAGGCTACCACGGAGCGAAGGCGGATGTGTGGTCGTGCGGAGTCATTCTGTTCACATTAGCGGCCGGGTATTTGCCGTTTAGCGACCCGAATTTGATGGTGATGTACAGGAAGATTTACAAAGGGGAATTCCGGTGTCCGAGGTGGATGTCGCCGGAGCTGAAGAGGTTATTGTGGCGGCTGCTGGACACGAAGCCGGAGACGAGGATCACGGTGGAGGAGATAATGAGGGACCCATGGTTCAGAAAAGGGTACAGGGAAGGGAATGTTGAGGAAGAAGAGAATTTGGGATACGGGTACGGGTACGGGTCAGTGTCGAAGGAGATGATGACCCAATTGAACGCGTTTGACATCATATCATTTTCGTCAGGGTTAGATTTGTCCGGGTTGTTCAAGGAGAAGGGCAAAATGGGGAATGCAGGGGAGTGGTGGGTGTCATCGGAGTCGCCGGAGAAAATATTGGAGAAGGTGGAGGAGTTGGGGAAGGAGAAGGGGCTGGCGGTGGGGAGGAAAAGGAAGTGTAGTATAGAGGTGGAGGGAGGGAAGGAGAATTTTGGAATTTGGGTAGAAGTTCACCGGTTAACGGAAGAGCTGGTTGTGGTGGAGGCAAGGAAAAGAGGCATAAACGGAGTGGCTTTGGAGCTCGTGTGGAACAACCATATGAGACCTGgactAAGCCTCAGATCTCAACCCACACAGCTTCTTCAGCTGGACGATGATGATCACTCTTCTCCTACCTCACTTTCACATAATTCTTCCTCAAATACTACTTCCAAGGTTCGGGTAGCAATCCAATCTGGATTCTGGACCTTACTCGACATGGCTAGTGGTCGTTATCTCTGGAGGCACTTCACCTCCTCCTCTTCATTTCATAATTAA 1434 0.5251 MEENNNALFGKYELGRLLGCGAFAKVYHGRNLQTSQNVAVKIISKKKITSSGLTSNVKREITIMSQLHHSHIVKLHEVLATKTKIFFILDFVKGGELFTKIAKGRFTEDLTRKYFHQLISAVRYCHSRGVYHRDLKPENLLVDDNGTLKVSDFGLSAVTDQIRPDGLLHTLCGTPAYVAPEILAKKGYHGAKADVWSCGVILFTLAAGYLPFSDPNLMVMYRKIYKGEFRCPRWMSPELKRLLWRLLDTKPETRITVEEIMRDPWFRKGYREGNVEEEENLGYGYGYGSVSKEMMTQLNAFDIISFSSGLDLSGLFKEKGKMGNAGEWWVSSESPEKILEKVEELGKEKGLAVGRKRKCSIEVEGGKENFGIWVEVHRLTEELVVVEARKRGINGVALELVWNNHMRPGLSLRSQPTQLLQLDDDDHSSPTSLSHNSSSNTTSKVRVAIQSGFWTLLDMASGRYLWRHFTSSSSFHN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4394 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Sto5g4394 477 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4394 477 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
Sto5g4394 477 PANTHER - 4 418 - -
Sto5g4394 477 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Sto5g4394 477 SUPERFAMILY Protein kinase-like (PK-like) 9 465 IPR011009 -
Sto5g4394 477 CDD CIPK_C 299 410 - -
Sto5g4394 477 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4394 477 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4394 477 Pfam NAF domain 296 353 IPR004041 GO:0007165
Sto5g4394 477 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Sto5g4394 477 Gene3D Kinase associated domain 1, KA1 299 412 - -
Sto5g4394 477 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 418 - -
Sto5g4394 477 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4394 Sto-Chr5 52499045 52502612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4394 3 433 CBL-interacting serine-threonine protein kinases AT2G30360 58.716 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto5g4394 Pkinase 9.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4394 - K12761 gsj:114377188 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2274 9 26140057 26141836 Sto5g4394 5 52499045 52502612 CCT
Sto5g4394 5 52499045 52502612 Sto5g4394 5 52499045 52502612 ECH