Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4390 ATGGAATTGCAAGGGTTGGTGGGTAAGCTAAGGAAAGGTCTAGAAGAATTCTCGAAAGACAAGGTACAGATGCTTGAGGGAGGAAATGCGTTCATGATGGTGTGTGAGGGATTGAAAGAGTTCGAACTTGTGTACAAAGAAGGTATAGACTTCTATATGTGTACTAGTTGgtgtggttttgggttttatgaAGCGGATTTTGGGTGGGGAAAGCCTAAGTGGGTCAGTATTCCTTCTTTGGGACTCAACAACACTTTTATTCTGATGGACACTAGTGACGACAAGGGAATTGAAGCATGGGTCACTTTGTGTGAGGAGGACATGGCCTTGTTAGAGACAAATCATGAATTGCGTGAATTTGCAACCTTGAACCCAACTATCATATAA 387 0.4031 MELQGLVGKLRKGLEEFSKDKVQMLEGGNAFMMVCEGLKEFELVYKEGIDFYMCTSWCGFGFYEADFGWGKPKWVSIPSLGLNNTFILMDTSDDKGIEAWVTLCEEDMALLETNHELREFATLNPTII 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4390 128 Pfam Transferase family 39 116 - -
Sto5g4390 128 Gene3D - 1 120 IPR023213 -
Sto5g4390 128 PANTHER F21J9.9 2 127 - -
Sto5g4390 128 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 2 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4390 Sto-Chr5 52481806 52482192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4390 48 112 Monolignol Biosynthesis Gene Families AT5G48930 35.616 8.92e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4390 - - hbr:110660191 137.887