Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4388 ATggttctctcttcttcttcttcttcttggttgCTATCATCGTTAGCTTTATTCCTAGTTGTTACAGCAGGGAGGTCGCAACTGTCTCCAAACTACTATCATCAATCTTGTCCAAAGCTTCCATTTATTGTCAAATCTGTTGTTCAATCTGCTGTCTCCAAACAACCTCGTCTAGCAGCTTCTATCCTTCGCCTCTTCTTTCATGACTGCTTCGTCAATGGTTGCGATGGTTCGGTGCTAGTGGATGACACAGGTTCGTTGAAAGGAGAGAAGACAGCTGCTCCTAACAATGGATCTTTGAGAGGGTTCGAAGTGATTGATGAAATCAAGTCAAAGGTGGAAGCAGCATGTCCTTCTCTTGTCTCTTGTGCTGATATCTTAACTATTGCTGCTCGTGATTCTGTTCTTCTCcTGGGAGGGCCTAATTGGGAGGTTAAACTTGGAAGAAGAGATTCCAAAACAGCAAGCTTCAATGATGCCAATAGTGGTGTGCTTCctcgtccttcttcttctcttgatACACTTATCTCTCTCTTTCAAGCTCAAGGCCTCTCTGTCAAGGACATGGTTGCCTTATCTGGAGGTCACACAATTGGGAAAGCAAGATGTATTAGTTTCAGAGATCGCATATACAATGAAACCAACATTGATAGTTTGTTTGCTAAAGCCAAGCAGATGAACTGTCCAAGGAGTAGTGGATCAGGAGATGATAATGTAGCAAACTTAGACATTCAAACCACTAATTATTTTGACAATAGCTACTTCAAGAACCTCATCAACAAAAGAGGTCTCCTTCACTCTGATCAAGTTCTCTTCAATGGCGGTTCTACTGATTCACTGGTTCAAACTTACAGCCAGAATGGAAACGCCTTCAATTGTGACTTTGTTGCTGCTATGATAAAGATGGGAGACATCAAACCCTTGCTTGCACCAAATGGGGAGATTAGGAAGAACTGTAGGAGAGTGAACTAG 972 0.3992 MVLSSSSSSWLLSSLALFLVVTAGRSQLSPNYYHQSCPKLPFIVKSVVQSAVSKQPRLAASILRLFFHDCFVNGCDGSVLVDDTGSLKGEKTAAPNNGSLRGFEVIDEIKSKVEAACPSLVSCADILTIAARDSVLLLGGPNWEVKLGRRDSKTASFNDANSGVLPRPSSSLDTLISLFQAQGLSVKDMVALSGGHTIGKARCISFRDRIYNETNIDSLFAKAKQMNCPRSSGSGDDNVANLDIQTTNYFDNSYFKNLINKRGLLHSDQVLFNGGSTDSLVQTYSQNGNAFNCDFVAAMIKMGDIKPLLAPNGEIRKNCRRVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4388 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Sto5g4388 323 PANTHER PEROXIDASE 14 322 - -
Sto5g4388 323 Gene3D Peroxidase, domain 2 166 302 - -
Sto5g4388 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Sto5g4388 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601|GO:0042744
Sto5g4388 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PANTHER PEROXIDASE 72-RELATED 14 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 Gene3D - 31 323 - -
Sto5g4388 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto5g4388 323 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4388 Sto-Chr5 52465631 52468859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4388 17 323 Peroxidase AT5G58400 64.401 3.37e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4388 K00430 - pvy:116134878 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4388 5 52465631 52468859 Sto5g4388 5 52465631 52468859 ECH