Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4377 ATGCCTTCGAGGGCTCTCCAATGGCTGAGCCTTGTAGGTATCATTTGGCTCCAAGCCATCAATGGCACAAACACAAACTTCCCTGCTTACTCCTCTCAGCTGAAACATCTTCTTTCAATCTCTCAATTGCAACTCAATAACTTAGCTTTTGCTTCTGATGCTGGAAAACTCTTTGGGTGGTTCTCTGGTATTGCTGCTCAATACCTTCCTCTTTGGCTTGTCCTTCTCATTGGTTCATCTCTTGGCTTAATAGGCTATGGTGTCCAATATTTGTTCCTCACAAACCAAATCTCCTCTCTTTCCTATTGGCAAGTCTTTCTTCTCACTGTTTTGGCTGGGAATAGCATTTGTTGGATTAACACTGTGTGCTATGTTGTTAGTATAAGGAATTTTCCATATGATAGGCAAGTTGCTGTGGGGTTATCAACAAGTTATCAAGGATTAAGTGCTAAGATTTATACCAATATTGTTGAAGCTTCTTCAAACAACATTAATAATGCCAAAACCTACCTTTTACTAAACTCCATTCTTCCTTTGATGGCTTGCTTAATGGCAATTCCTATAGTGAGAGAGATTGAAGGGGTTAATTATACAAACATGGGTGTTGGATTTGTTTTGATGTTTGTTATTACAATTGGGACTGGAATATATGCTGTGATGAGTAGCTTGGGATTTGTGTCACACAAATTATCTTCCTTGAGTATTTTGGTTGGTATTGTGGTGTGTCTTCTCTTGCCTTTGATTGTTCCTTTTGTAGAGAAGATGAAGGAATTGGTGGGTGTGACAATTGGGTTGGTATATTTGAATAATTTGGGGCAAATAGCTGAATCTAGAGGAAGTGCTACATCATCTTTGGTTGTTTTGTCTTCATCTTTTGGCTTCTTTGGACGTCTCATGCCATCACTAATGGACTACTTCTACAGGGGTAAAAGCGTAATTTCAAGACCAGGATGTATGGTGGCACTGATAGCCCCAACAGCAGGAGCATTCTTCTTACTTTTGAACAAGACAGAGACAGCACTTTACATAAGCACAGGCATAATAGGAGTGTGCAGTGGGGCCATCACTTCCATTTGTGTGTCGACAACCTCAGAGCTGTTTGGGACTAAGAATTTCAGTGTGAACCACAATGTGGTTGTAGCCAATATCCCCATTGGCTCCTTTCTCTTTGGCTTCTCATCGGCAATTCTTTACCACAAGGAAGCAGATCATCATACTGGCAAATGCATGGGCATGCAATGCTATCAAACCACTTTCATCATTTGGGCTGCCCTTTCTCTTTTCGCCACTTTCTTGGCTTTCATTCTTTATGCTAGAACTCGCAAATTTTATTCTCCTCCTACGTAG 1347 0.4076 MPSRALQWLSLVGIIWLQAINGTNTNFPAYSSQLKHLLSISQLQLNNLAFASDAGKLFGWFSGIAAQYLPLWLVLLIGSSLGLIGYGVQYLFLTNQISSLSYWQVFLLTVLAGNSICWINTVCYVVSIRNFPYDRQVAVGLSTSYQGLSAKIYTNIVEASSNNINNAKTYLLLNSILPLMACLMAIPIVREIEGVNYTNMGVGFVLMFVITIGTGIYAVMSSLGFVSHKLSSLSILVGIVVCLLLPLIVPFVEKMKELVGVTIGLVYLNNLGQIAESRGSATSSLVVLSSSFGFFGRLMPSLMDYFYRGKSVISRPGCMVALIAPTAGAFFLLLNKTETALYISTGIIGVCSGAITSICVSTTSELFGTKNFSVNHNVVVANIPIGSFLFGFSSAILYHKEADHHTGKCMGMQCYQTTFIIWAALSLFATFLAFILYARTRKFYSPPT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4377 448 SUPERFAMILY MFS general substrate transporter 4 195 IPR036259 -
Sto5g4377 448 SUPERFAMILY MFS general substrate transporter 230 442 IPR036259 -
Sto5g4377 448 Gene3D MFS general substrate transporter like domains 259 444 IPR036259 -
Sto5g4377 448 Pfam Nodulin-like 7 251 IPR010658 -
Sto5g4377 448 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 259 - -
Sto5g4377 448 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 258 445 - -
Sto5g4377 448 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 258 445 - -
Sto5g4377 448 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4377 Sto-Chr5 52397542 52400249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4377 258 445 Nodulin-like Gene Family AT2G30300 56.771 2.92e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4377 - - cmax:111492867 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2257 9 26017634 26018761 Sto5g4377 5 52397542 52400249 CCT
Sto5g4377 5 52397542 52400249 Sto5g4377 5 52397542 52400249 ECH