Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4372 ATGGAACTTCTTCAAGATCACAACTTACGTTCTGGTAAGTTCAATTATAAGCAGCATCATGTTATTTGCAAGCAAGTGGAAACTCTCAAGGAGTTTTCTGCTCAAACTTCATTTGGGTTTTCTGATTTTGATGCTCACAACTTTACAAATTTGGGATTCGAAGTGGATCTTCTTAACTTTTTCCTAGGTTGTCTCACCATACAATTGATGAAGATTAACTTAATGCTGGGCTTTCTTGCTGCCATTTTCTGCTATTTCCTCATTGTTCTTCGTTCTAATTCCAATCCCCAATTAGAAATTGGTGCTATTAGAGATGAAGACCATGTAGAAGTAGAAGTTATTGAAACTGTAGTAATAGGAGATGGTGCTAGGAATCATCAGAATCAGACATTAAGAAGAAGGTTTGATGATGGGTATAATTGGAAGAAATATGAAGAAAAGCAAGTGAAAGGAAGTGGAAATTATACAAGTTACTATAAATGCACAAATCCCAATTGCTCAGTAAAGAAGAGAATTGAGAGGTGTGTGGATGGGAAGGGTAGTGAGGTAATTTACAAGGGTACACATAACCATTGCAAGCCTAAGCATGCATCACTGAACAGAAATTCGTCATTTGAAACTCTTCCTGCAATTCATCCTTCAAAAATGGTTCCTATTGAAATCCCATACCAACAATTGGATTCGGTTGATACACCAGACAACTCTTCCGTATCAATATGA 720 0.3667 MELLQDHNLRSGKFNYKQHHVICKQVETLKEFSAQTSFGFSDFDAHNFTNLGFEVDLLNFFLGCLTIQLMKINLMLGFLAAIFCYFLIVLRSNSNPQLEIGAIRDEDHVEVEVIETVVIGDGARNHQNQTLRRRFDDGYNWKKYEEKQVKGSGNYTSYYKCTNPNCSVKKRIERCVDGKGSEVIYKGTHNHCKPKHASLNRNSSFETLPAIHPSKMVPIEIPYQQLDSVDTPDNSSVSI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4372 239 Pfam WRKY DNA -binding domain 136 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4372 239 ProSiteProfiles WRKY domain profile. 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4372 239 SMART WRKY_cls 135 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g4372 239 SUPERFAMILY WRKY DNA-binding domain 134 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g4372 239 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 126 238 - -
Sto5g4372 239 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 238 IPR044810 GO:0003700
Sto5g4372 239 Gene3D WRKY domain 121 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4372 Sto-Chr5 52350014 52350836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4372 124 196 WRKY Transcription Factor Family AT1G13960 56.164 5.84e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto5g4372 WRKY 5.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4372 K13424 - gmx:102667674 162.54