Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4371 ATGGCTGAGAGTGGTGAAGAGAAGTTATTGGCTGTGGCGCGTCACATAGCGAAGACGCTAGGCCACGATACCAACACCGCCGATGATATTCTTAAAATCTTCTCCAACTTCGATGGAAGATTCTCGCTGGAGAAGTTGTCGCAGAAAAGggacgatgatgatgatcacAGAAGCTACTCAGCACTTGAAAATACTCTCAACTCTCTCGACCGTCGGATCTCCCAACACGTGTCCTCCGATCACCCCATCTGGTCCGACCCCGCCGACTCCGCAGCCTTCCTCGACGCCGTCGATGAGTTAATCGCCACGCTCGACGACTGGAGCCCTTTGGCGGCGGATAAGGCCGTCGGCGCGTGCTTGGTACGCGCCGAGGATATGCTTCAGCATGCCATGTTGCGGGCTGAGGAAGAGTTCAGGTCTCTCATGGAacgcggcggcggcggcgagtCGTTTCATGAGTCAACTCGCAGCCTATGTTCTGACTCGGAGGACGATGACGTGGACGATGACGAGGAAGAAGCTGAAGTAGAGGAGGATTTTCAGATTCCGGTGGCGAAGCCGGTGGCGGATTACGACGTCGTAATCGATGCTCTACCTTCTGGAACCGTCCACGAGCTTCACGAGATCGCGAAGCGAATGGTGGCCGCTGGATTTGGGAAGGAGTGCTCGCACGTGTATAGCACCTGCCGAAGAGAATTCCTGGAGGAAAGCTTATCGCGATTAGGGTTACAGAAGCTAAGCATCGAAGAAGTTCACAAGATGCCATGGCAAACCCTAGAAGACAAGATCGAAAGATGGATCAAAGCCTCCAACGTCGCTCTCCGAATACTCTTCCCCAGCGAACGACGACTCTGCAGCCATGTCTTCTTCGGCTTCTCCTCTGCTTCCGATCTCTCCTTCATGGAGGTTTGCCGCGGATCGACGATTCAGCTACTCAATTTCGCCGACGCCGTCGCGATCGGGAGCCGATCACCGGAGCGATTGTTTCGAATTTTGGACGTGTACGAAACATTGCGAGACCTAATTCCGGAATTCGAGTCCTTATTCTCCGATCAGTACAGTGTAGTTCTCAGAAACGAAGCAATCACAATCTGGAAGAGATTAGGGGAAGCAATCAGAGGCATTTTCATGGAACTAGAGAATCTGATTCACCGCGATCCGGCGAAGGCGGCGGTTCCAGGCGGCGGGCTCCACCCAATCACCCGCTACGTGATGAACTACCTCCGCGCCGCTTGTCGTTCCAAGGAGACTCTAAAGCAGGTCTTCGAAACCGACTCTGGAGAATCTGATTCTTCACTATCTGTTCAAATTGCTTGGATCATGGACTTATTAGAGAGTAATTTAGaatccaaatccaaaatctATAAGGACACTGCATTATCCTCTGTTTTCATGATGAACAATGGGAGGTACATAGTTCAAAAGGCAAGAGATAGTGAACTAGGATCCCTTCTAGGTGATGATTGGATTCGAAAACACAATGGAAAAGTGAGGCAATACCATGTGAGCTATCAAAGAAGCTCATGGAACAAGGTGCTGAACTTGATGAAGCTAGAAAGTGGATCATCAATGGCATCTAATAATGGTGTGTCTGGGAAGAGTATGAAAGAGAAGCTGAAGTTGTTCAACTTGCAGTTTGAGGAAATATGCAGAGTTCAATCCACATGGTGTGTGTTCGATGAGCAGTTAAGGGAAGAGATAAGGATTTCTCTGGAAAGGATTTTGCTGCCTGCGTATGGGAACTTCATTGGAAGGTTCGAGAATGTTTCGGAACTGAGGAAACATTCTGATAAGTATATCAAGTATGGTGTGGAGGATATTGAAGCTAGGCTTCAAGACTTGTTTCATGGAAGCAATGGATCCACTGGATTGGATGCTTTCTGGTGA 1887 0.4791 MAESGEEKLLAVARHIAKTLGHDTNTADDILKIFSNFDGRFSLEKLSQKRDDDDDHRSYSALENTLNSLDRRISQHVSSDHPIWSDPADSAAFLDAVDELIATLDDWSPLAADKAVGACLVRAEDMLQHAMLRAEEEFRSLMERGGGGESFHESTRSLCSDSEDDDVDDDEEEAEVEEDFQIPVAKPVADYDVVIDALPSGTVHELHEIAKRMVAAGFGKECSHVYSTCRREFLEESLSRLGLQKLSIEEVHKMPWQTLEDKIERWIKASNVALRILFPSERRLCSHVFFGFSSASDLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDVYETLRDLIPEFESLFSDQYSVVLRNEAITIWKRLGEAIRGIFMELENLIHRDPAKAAVPGGGLHPITRYVMNYLRAACRSKETLKQVFETDSGESDSSLSVQIAWIMDLLESNLESKSKIYKDTALSSVFMMNNGRYIVQKARDSELGSLLGDDWIRKHNGKVRQYHVSYQRSSWNKVLNLMKLESGSSMASNNGVSGKSMKEKLKLFNLQFEEICRVQSTWCVFDEQLREEIRISLERILLPAYGNFIGRFENVSELRKHSDKYIKYGVEDIEARLQDLFHGSNGSTGLDAFW 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4371 628 MobiDBLite consensus disorder prediction 144 177 - -
Sto5g4371 628 Pfam Exo70 exocyst complex subunit 264 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto5g4371 628 SUPERFAMILY Cullin repeat-like 84 616 IPR016159 -
Sto5g4371 628 MobiDBLite consensus disorder prediction 162 177 - -
Sto5g4371 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 616 - -
Sto5g4371 628 Gene3D Exocyst complex component Exo70 79 622 - -
Sto5g4371 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 616 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4371 Sto-Chr5 52341166 52343163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4371 1 623 EXO70 exocyst subunit family AT5G58430 69.365 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4371 K07195 - tcc:18591039 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4371 5 52341166 52343163 Sto5g4371 5 52341166 52343163 ECH