Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4366 ATGGCGACAGACGCGACGGCCAAATTCAAGAACCCCGAGTTTCGCCCTATTCCGCAGCCGCCAGATTTCCATCCAGAGATTACCGTTTCAGCCCACGATGGCTTGCATTTTTGGCAGTTCATGATTGCAGGTTCTGTCGCCGGCTGCATTGAGCACATGGCGATGTTCCCCGTCGACACCGTGAAGACCCATATGCAAGCTCTCGGGTCTTGCCCGATTAGGTCCGTTAGCATTCGGCAAGCCCTTGGTTCGATTTTGAAATCTGAGGGTCCATCTGCTCTGTACCGTGGTATCGGCGCGATGGGTCTCGGTGCCGGACCGGCTCATGCTGTGTATTTTTCCGTTTATGAGGCGTGTAAGAAATATTTCTCTGGTGGAAATCCCAGTAATTCTGCTGCGCATGCGGTTTCGGGTGTATGTGCTACTGTTGCGAGCGATGCTGTGTTTACGCCCATGGATATGGTCAAGCAGAGATTGCAATTAAGTAAGAGTGGTTACAATGGTGTTTGGGACTGTATAAGGAGGGTGTTGAGTGAGGAGGGATTTGGAGCTTTTTATGCATCGTATAGGACTACAGTTTTGATGAATGCACCATTTACAGCAGTGCATTTTGCTACATATGAGGCTGTTAAAAGAGGCTTAATGGAGTTTTCGCCTGATAGTGCTGATGATGAGCGTTTGGTTGTTCATGCTACAGCTGGAGCTGCTGCTGGAGCTTTGGCTGCTGCTGTTACGACACCCCTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGTGCACTTTTCCCCAATGTGTTTTTTACTAGCTGCATATTTATCCAAATTTATTGATTCACAGGGCGTCTGTGGATGTGATAGATTTAAAAGTAGCTCAATTGGAGATGTTGTTAAGACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGAGTCCAAGGATGCTCTTCCATGCTCCTGCTGCTGCAATCTGCTGGTCTACTTATGAAGCTGGGAAGACATTTTTTCAAGAATTGAATGATAGTAAGAACAGGGACACCATCacctaa 1053 0.471 MATDATAKFKNPEFRPIPQPPDFHPEITVSAHDGLHFWQFMIAGSVAGCIEHMAMFPVDTVKTHMQALGSCPIRSVSIRQALGSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYEACKKYFSGGNPSNSAAHAVSGVCATVASDAVFTPMDMVKQRLQLSKSGYNGVWDCIRRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAVKRGLMEFSPDSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQVHFSPMCFLLAAYLSKFIDSQGVCGCDRFKSSSIGDVVKTIVKKDGYRGLMRGWSPRMLFHAPAAAICWSTYEAGKTFFQELNDSKNRDTIT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4366 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 336 IPR018108 -
Sto5g4366 350 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Sto5g4366 350 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Sto5g4366 350 Pfam Mitochondrial carrier protein 226 339 IPR018108 -
Sto5g4366 350 Gene3D Mitochondrial carrier domain 22 164 IPR023395 -
Sto5g4366 350 MobiDBLite consensus disorder prediction 1 21 - -
Sto5g4366 350 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 259 - -
Sto5g4366 350 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 277 345 - -
Sto5g4366 350 SUPERFAMILY Mitochondrial carrier 33 331 IPR023395 -
Sto5g4366 350 Gene3D Mitochondrial carrier domain 165 349 IPR023395 -
Sto5g4366 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Sto5g4366 350 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Sto5g4366 350 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Sto5g4366 350 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Sto5g4366 350 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Sto5g4366 350 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Sto5g4366 350 PANTHER MITOFERRIN-1-RELATED 1 259 - -
Sto5g4366 350 PANTHER MITOFERRIN-1-RELATED 277 345 - -
Sto5g4366 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4366 Sto-Chr5 52301553 52304951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4366 1 345 Chloroplast and Mitochondria Gene Families AT2G30160 71.429 4.54e-175 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4366 5 52301553 52304951 Sto5g4366 5 52301553 52304951 ECH