Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4364 ATGGGAGGTTCTTCTTCACCTTGTGCTTCCTGCAAGCTGTTACGACGTCGTTGCACCAAGGAGTGCATCTTCGCTCCTTACTTCCCTTCCGATGATCCTCATAAGTTCGCCATCGTCCACAAGGTCTTCGGTGCTAGCAATGTCAGCAAAATGTTACAGGAGCTTCCATTGCATCAAAGAGGAGATGCAGTGAGCAGTTTAGTGTACGAGGCAAATGCTCGGGTGAGAGATCCAGTCTACGGATGTGTAGGGGCAATATCGTACTTGCAAACCCAGGTCTCGCAATTGCAAATGCAGCTTGCGGTGGCTCAGGCTGAGATCCTCTGCATCCAGATGCAGCAAGACCCTAGTACAACTACCAGTAATATTATACCGAACCAAATCGACCAATTTCAACATGACAAATCATCGCCGCTTCTTCTATCTGATGATAATTACGAATTAACCAGTGTTGTTAATATTAATCCTCATCCTCATGATCATCATCAGTATCTCgcatttgcttcttcttcttcttcatctaatTCCAATGTACTACTCCAAGACTCTCTTAAGAGAGAGCCTTTTTggacttaa 576 0.4253 MGGSSSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISYLQTQVSQLQMQLAVAQAEILCIQMQQDPSTTTSNIIPNQIDQFQHDKSSPLLLSDDNYELTSVVNINPHPHDHHQYLAFASSSSSSNSNVLLQDSLKREPFWT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4364 191 Coils Coil 86 106 - -
Sto5g4364 191 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Sto5g4364 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 175 - -
Sto5g4364 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Sto5g4364 191 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4364 Sto-Chr5 52289720 52290409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4364 1 191 AS2 family AT2G30130 60.488 3.69e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto5g4364 LOB 3.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4364 - - csin:114310389 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4364 5 52289720 52290409 Sto5g4364 5 52289720 52290409 ECH