Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4359 ATGTCGAAGGTGGTTTGCGTCACCGGCGGTAGCGGCTGCATAGGATCGTGGCTCGTTCATCTCCTTCTCGAACGCGGCTACACCGTTCACGCCACCGTCAAAGATCTCAAGGATGACACTGAAACCAAACATCTAGAAGCCCTAGAAGGAGCTGGTACTCGCCTTCGTCTCTTCCAGATCGACCTCCTCGACTACGACTCCATCGTCGCCGCCGTGAACGGCTGCGTCGGCGTTTTCCATCTCGCCTCTCCTTGCATTGTCGACAAAGTTCTAGATCCTCAGAAGGAGCTTCTGGACCCGGCGATTAAGGGGACAACAAATGTGCTGACGGCGGCGAAGGAAGCAGGGGTGAGTCGCGTCGTGGTAACTTCGTCGATCTCGGCTATATCTCCGAATCCAAATTGGCCGTCTGATGTTATTAAAAGTGAAGATTGCTGGGTGGACCTTGAATATTGCAAGGAAAAGGAATTGTGGTATCCGATGTCAAAAACATTAGCTGAGAAGTCTGCTTGGGAGTTTGCCAAGGAGAAAGGTTTGGATGTTGTGGTGGTAAATCCTGGCACTGTGATGGGCCCTGTTATTTCTCCAAAACTTAATGCTAGCATGATAATGCTTGTGCGTCTTCTTCAAGGCTGCACTGAAACATATGAGAACTTTTTTATCGGATCAGTCCACTTTAAAGACGTAGCCTTAGCACATATTTTGGTGTACGAAAATAAAGCAGCAGCTGGTAGGCACATGTGCGTTGAAGCTATCTCCCACTATGGTGACTTCGTGGCAAAGGTTGCTGAACTTTATCCCGAGTATAACGTGCCTAAGTTGCCTCGAGATACCCAACCAGGATTGTTGAGAGCAAAAGATGCATCCAAGAAGCTGATCGATTTGGGTTTGCAATTCATTCCCATGGAGCAAATTATTAAGGATGCGGTAGAATGTTTGAAGAGCAAGGGGTTCATTTGA 960 0.4823 MSKVVCVTGGSGCIGSWLVHLLLERGYTVHATVKDLKDDTETKHLEALEGAGTRLRLFQIDLLDYDSIVAAVNGCVGVFHLASPCIVDKVLDPQKELLDPAIKGTTNVLTAAKEAGVSRVVVTSSISAISPNPNWPSDVIKSEDCWVDLEYCKEKELWYPMSKTLAEKSAWEFAKEKGLDVVVVNPGTVMGPVISPKLNASMIMLVRLLQGCTETYENFFIGSVHFKDVALAHILVYENKAAAGRHMCVEAISHYGDFVAKVAELYPEYNVPKLPRDTQPGLLRAKDASKKLIDLGLQFIPMEQIIKDAVECLKSKGFI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4359 319 Pfam NAD dependent epimerase/dehydratase family 5 239 IPR001509 -
Sto5g4359 319 CDD FR_SDR_e 5 297 - -
Sto5g4359 319 Gene3D - 1 319 - -
Sto5g4359 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Sto5g4359 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Sto5g4359 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4359 Sto-Chr5 52266465 52269101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4359 3 319 Monolignol Biosynthesis Gene Families AT5G58490 79.495 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4359 - - adu:107458329 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4359 5 52266465 52269101 Sto5g4359 5 52266465 52269101 ECH