Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4356 atggaGGCTTTCATGGTGATTATGATACTGTCTCTGTTTTGTTTGAACACGAAACAGAGTGTCTCTTTGCCTCTGAATGATCTGAACACACAAGgtTTGGCGTTGCTGAAGTTGAGAGAGAGAGTAGTGAGTGATCCTTTTGGAGCTTTATCCAATTGGAATGTCAACCATGGAGTCATCGATCCTTGTTCTTGGTTCGGAGTTCATTGCTCTCAAGCCAAACTTGTTACCTTGAATTTAAATGGCCTTTGTCTCCAAGGAACAATAGGACCCGAAATTGGGAAGCTAACTCACCTAAAATCTATAATTTTGCGCAACAATTCTTTCTCTGGAGAAATACCTAAGGAGATGCTACAATTAGAAGAACTTGAAGTTGTTGACTTGGGATATAATAACTTTAGTGGATCATTTCCATCTGATCTTGATACCAATCTATCATTGACTACCCTTTTACTGGACAACAATGACTATCTTGCTAACCTAACTCCTGAAGTGTATAAGCTCAAGATGATTTCTGAATCTCGTGTAAATGAAGAACTACTAACTGGAGGTGCCCCTACAAAAGCAGCATGTATAAGCAGATCTAGTTTCTGGTATAGGAGGCAACTTCTTCAAGTGGCAAATGCTCCCTCTTCATTACCACCAGATTCTGAGCCTTTCACACCATCTCCTTTATCAGTTTCTCCATCTCCATCCATTTTTATTCCTCCTTCATCCtcaccttcaccttcaccttcaccttcTGCTTCACCAGAGATATCAGAGCCAGCAAATCCACCTTCTGTTGTGTCCTCACCACCAAACTCCACTTGGGATTCAGAGCCATCTCCTTCTCCAATCTCAAACCAGAAGAGTTCTGAGACAAAGAATCATACTGTGATAATTTGGTCTACAGTTGGGAGTTTTTCCTTTCTGGTTTTGGTGTCAGCAGTTGTTTTTGTTTGCTTCAGAAATACTAAGGTTGTCACTGTCAAACCTTGGCCTATTGGCTTGAGTGGTCAGCTCCAAAAAGCCTTTGTAACTGGTGTGCCAAGTCTAAAAAGAGCAGAACTTGAAGCAGCTTGTGAAGATTTCAGCAACATTATTGGATCTCTTCCTGAGGGTACTGTTTATAAAGGGACTCTCTCAAGTGGAATTGAGATAGCTGTAGTATCCACTGCAGTGACCTCATCTCAGAACTGGTCAAAACATATGGAAGTCCAATTTAGGAACAAGTTAGAGACATTATCTAGAGTGAACCACAAGAACTTTGTGAATCTTATTGGGTACTGTGAAGAAAAGAAGCCCTTCACCAGAATGATGGTTTTTGAGTATGCTCCAAATGGAACACTCTTTGAGCATCTACACATTAGAGAAGCAGAACACCTTGACTGgggaatgagaatgaggatAGCCATGGGAATAGCCTACTGCCTAGAGCACATACATCAGCTAACACCACCCATTTCCCACACAAACCTCCAATCTTCCTCTATATGCCTCACTGAAGATTATGCTGCTAAAATATCAGATCTCAGTTTGTGCAATGACATAATCACCCCTGCCAAGAAGACTTCTACTATAGCAACACCACCATCAGCATGTACAAAAGACAATGTGTATAGCTATGGAGTAATGTTGTTTGAACTTATAACAGGTACAATTCCCAATGCTGTGGTGGACAATGGCATTTTTCTTGCAGATTGGGGCAAGAAACCATTGAAAGATGTGGTGGATCCTACTCTGAGCTCTTTGACAGAAGAAGAGATTGAGAAATGGTTCAAAGTGATACAAGAATGTGTGAATTCGGACCCGGAAAAACGACCAAGTATGAGAGAGGTTACTGCTAGGTTGAAGGAAGTTACTGCAATGGAACCTGATGGAGCAACACCACAGTCATCCCCTCTTTGGTGGGCAGAACTTGAAATTTTGTCTGGGGATTCAAGCTGA 1929 0.4033 MEAFMVIMILSLFCLNTKQSVSLPLNDLNTQGLALLKLRERVVSDPFGALSNWNVNHGVIDPCSWFGVHCSQAKLVTLNLNGLCLQGTIGPEIGKLTHLKSIILRNNSFSGEIPKEMLQLEELEVVDLGYNNFSGSFPSDLDTNLSLTTLLLDNNDYLANLTPEVYKLKMISESRVNEELLTGGAPTKAACISRSSFWYRRQLLQVANAPSSLPPDSEPFTPSPLSVSPSPSIFIPPSSSPSPSPSPSASPEISEPANPPSVVSSPPNSTWDSEPSPSPISNQKSSETKNHTVIIWSTVGSFSFLVLVSAVVFVCFRNTKVVTVKPWPIGLSGQLQKAFVTGVPSLKRAELEAACEDFSNIIGSLPEGTVYKGTLSSGIEIAVVSTAVTSSQNWSKHMEVQFRNKLETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEHLDWGMRMRIAMGIAYCLEHIHQLTPPISHTNLQSSSICLTEDYAAKISDLSLCNDIITPAKKTSTIATPPSACTKDNVYSYGVMLFELITGTIPNAVVDNGIFLADWGKKPLKDVVDPTLSSLTEEEIEKWFKVIQECVNSDPEKRPSMREVTARLKEVTAMEPDGATPQSSPLWWAELEILSGDSS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4356 642 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Sto5g4356 642 SUPERFAMILY Protein kinase-like (PK-like) 341 611 IPR011009 -
Sto5g4356 642 MobiDBLite consensus disorder prediction 215 254 - -
Sto5g4356 642 Gene3D Ribonuclease Inhibitor 30 199 IPR032675 -
Sto5g4356 642 Gene3D Transferase(Phosphotransferase) domain 1 440 620 - -
Sto5g4356 642 SUPERFAMILY L domain-like 39 169 - -
Sto5g4356 642 MobiDBLite consensus disorder prediction 209 285 - -
Sto5g4356 642 Gene3D Phosphorylase Kinase; domain 1 333 438 - -
Sto5g4356 642 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 640 - -
Sto5g4356 642 Pfam Protein tyrosine and serine/threonine kinase 360 611 IPR001245 GO:0004672|GO:0006468
Sto5g4356 642 ProSiteProfiles Protein kinase domain profile. 356 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4356 642 PANTHER PROTEIN MALE DISCOVERER 2 6 640 - -
Sto5g4356 642 MobiDBLite consensus disorder prediction 255 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4356 Sto-Chr5 52219219 52224288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4356 31 619 Receptor kinase-like Gene Family AT2G35620 26.570 1.53e-43 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto5g4356 PK_Tyr_Ser-Thr 2.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4356 - - gmx:100814122 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4356 5 52219219 52224288 Sto5g4356 5 52219219 52224288 ECH