Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4351 TTGGGCAAAATGGTCGATGATTTTGATGTCCGGAAAATCAGAAACATATGTATTTTGGCACATGTCGATCATGGAAAGACTACGCTAGCTGATCATTTAATTGCCGCTTCAGGGGGTGGCATACTTCACCCTAAGTTGGCTGGACGCATTAGGTTCATGGATTATCTCGATGAGGAGCAAAGAAGGGCTATCACCATGAAGAGTTCTTCCATTGCTCTGCAATATAAGGACCACTCTATTAACCTCATAGACTCCCCTGGTCACATGGACTTTTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCCTTGATTTTGGTTGATGCTGTTGAAGGTGTGCATATTCAAACCCATGCCGTGTTGCGGCAATGTTGGATTGAGAAGCTCTCGCCATGCTTGGTTCTTAACAAGATTGACAGGTTGATTAGTGAATTAAAGTTGAGTCCCATGGAAGCCTATACTCGGTTATTAAGGATTGTGCACGAAGTCAATGGGATAGTCAGTGCATATAAGTCTGAGAAGTATCTGTCAGATGTTGATTCCATACTTGCAGGACCTTCAGGTGACGTAATTGGTGATGAAAATTGTGATCTCATagaggatgatgatgaagatatgTTTCAACCACAGAAAGGGAATGTGGCATTTGTGTGTGCACTAGATGGTTGGGGATTTGGAATTCATGAGTTTGCTGAATTTTATGCTTCAAAACTTGGGGCTAGTGCTGCTGCATTGACGAAAGCCTTATGGGGTCCTCGATATTTCAATCCAAAGACTAAAATGATTGTTGGTAAGAAAGGCATAGGTGGAGGAAGTAAGGCTAGACCAATGTTTGTACAGTTTGTTCTTGAACCTCTATGGCAAGTATACCAGGGAGCACTAGAGGATGATGGGGACAAAGGATTGCTTCAGAAAGTCATTAAGTCATTTAATTTGTCTGTACCACCTCGTGAACTGCAAAATAAAGACCCCAAAGTTGTGCTTCAAGCTGTTATGAGCCGGTGGCTTCCTCTATCACATGCAATCTTATCAATGGTGGTTAATTGTATGCCAGACCCAATATCAGCACAATCATTTCGTATCTCGCGTCTTCTTCCAAAGAGAGAGGTTATTGGTGATGGGGTTGATCAGAATGTGCTTGCAGAAGCCGAGCTTGTGAGAAAATCAGTAGAGGCATGTGATTTGAGACCTGAAGCTCCATGTGTTGCTTTTGTATCGAAAATGTTTGCTGTCCCCGTCAAATTGCTTCCCCATAGGGGCTCACATGGGGAGATCATTAACTATTCTGGTGATGAAGGAGAGGGTGAATCAGATGAGTGTTTCTTGGCATTTGCTAGGATATTCAGTGGAGTTTTATCAGCTGGACAGAGAGTTTTTGTGCTTTCAGCTTTGTACGATCCACTAAAAGGGGAACAAATGCAAAAGCATGTGCAAGAAGCAGAATTACAATCCCTGTATCTAATGATGGGCCAAGGCTTGAAAGTAGTAACATCTGCAAAAGCAGGAAATATTGTTGCCATCCGAGGCCTTGGCCAACATATCCTGAAAAGTGCTACACTTTCATCTAGTAGGAATTGTTGGCCTTTCTCTAGTATGGCTTTCCAGGTAGCCCCTACTCTGAGAGTTGCAATTGAGCCATCTGATCCTGCAGATATTGACTACGTTGaaaaaagaacaccaaatggaAGATGTGCTGTTCGTGTGCATGTGATGAAACTTCCATCTTCACTGACAAAGGTGCTTGAAGATAGTTCTGATGCACTTGGAGATGCCATTGGACTAAAGTCAGGGCAGACAGATAAAAATTTGGATACTCAGAGATCAAGTATTCTTGAAAATGATAATCCATCTGAAGTTCTGAGAAAACGCATAATGGATGCAGTGGAAGGTGAGATTTCAAGTAGGAATGAGAATGACAAAGATTATGCTGAAAAATGTAAGGTGAAGTGGCTAAAGCTTTTGAGGAGGATATGGTCACTTGGACCAAGGCAAATTGGTCCCAACATTCTCTTGACTCCTGATGTTAAAGAGGAGAGTACTGAGAGCTCTGTTCTAATACGTGGTCATTCTCATGTATCAGAAAGGTTGGGTTTTGTTGATGATTCTGGTACTTGTAATACAGTAGCTGAGACATCTTCTAATGCTAACGAACCATTAAACATGGACGCCGAGCGTCTTGAGAGTAGTATCATATCTGGATTCCAACTGGCCACTGCAGCTGGACCCTTATGTGATGAACCTTtgtggggtttggcatttgtcATTGAGGCATATATTTATCCCTCTATAGGGCAGAATGACGAAGCCGAAGCACACCAACAATCTGAGCAGTATGGCGTCTTTGCAGGACAAGTAATCACAACTGTCAAAGATGCTTGTAGAGCCGCCGTGCTTCAGAATAACCCGAGGCTTGTGGAAGCCATGTACTTTTGTGAGTTGAACACCCCTACTGAATTTTTGGGTCCCATGTATGCCGTACTTGCGCGAAGACGAGCCCGAGTGTTGAAGGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACGGTGCACGCTTACGTGCCAGTCTCGGAAAGCTTTGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGGGCAGCAAGTGCACTTCTTGTCCTTAGTCACTGGGAAGCACTTTCTGAGGATCCTTTCTTTGTACCGAAAACTGAAGAGGAAATTGAAGAGTTTGGAGACGGCTCGAGTGTGCTTCCTAATACAGCGAGAAAGCTAATCGATGCCGTTAGACGGCGAAAGGGCCTTCCGGTCGAGGAAAAAGTAGTACAGCATGGAACAAAACAGAGGACACTAGCTCGCAAAGTCTGA 2844 0.4293 LGKMVDDFDVRKIRNICILAHVDHGKTTLADHLIAASGGGILHPKLAGRIRFMDYLDEEQRRAITMKSSSIALQYKDHSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYTRLLRIVHEVNGIVSAYKSEKYLSDVDSILAGPSGDVIGDENCDLIEDDDEDMFQPQKGNVAFVCALDGWGFGIHEFAEFYASKLGASAAALTKALWGPRYFNPKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGALEDDGDKGLLQKVIKSFNLSVPPRELQNKDPKVVLQAVMSRWLPLSHAILSMVVNCMPDPISAQSFRISRLLPKREVIGDGVDQNVLAEAELVRKSVEACDLRPEAPCVAFVSKMFAVPVKLLPHRGSHGEIINYSGDEGEGESDECFLAFARIFSGVLSAGQRVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSRNCWPFSSMAFQVAPTLRVAIEPSDPADIDYVEKRTPNGRCAVRVHVMKLPSSLTKVLEDSSDALGDAIGLKSGQTDKNLDTQRSSILENDNPSEVLRKRIMDAVEGEISSRNENDKDYAEKCKVKWLKLLRRIWSLGPRQIGPNILLTPDVKEESTESSVLIRGHSHVSERLGFVDDSGTCNTVAETSSNANEPLNMDAERLESSIISGFQLATAAGPLCDEPLWGLAFVIEAYIYPSIGQNDEAEAHQQSEQYGVFAGQVITTVKDACRAAVLQNNPRLVEAMYFCELNTPTEFLGPMYAVLARRRARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4351 947 CDD eEF2_snRNP_like_C 808 886 - -
Sto5g4351 947 Pfam Elongation factor Tu GTP binding domain 12 343 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 Gene3D Yeast translation eEF2 (G' domain) 229 338 - -
Sto5g4351 947 SMART EFG_C_a 805 894 IPR000640 -
Sto5g4351 947 Gene3D - 804 938 - -
Sto5g4351 947 CDD EF2_II 402 525 - -
Sto5g4351 947 CDD EF2 14 237 - -
Sto5g4351 947 Pfam Elongation factor G C-terminus 806 890 IPR000640 -
Sto5g4351 947 Gene3D - 554 802 IPR014721 -
Sto5g4351 947 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 559 946 - -
Sto5g4351 947 Gene3D - 5 196 IPR027417 -
Sto5g4351 947 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 11 245 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 TIGRFAM small_GTP: small GTP-binding protein domain 12 143 IPR005225 GO:0005525
Sto5g4351 947 SUPERFAMILY Translation proteins 393 534 IPR009000 -
Sto5g4351 947 Pfam Elongation factor Tu domain 2 444 522 IPR004161 GO:0005525
Sto5g4351 947 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 12 558 - -
Sto5g4351 947 SUPERFAMILY Ribosomal protein S5 domain 2-like 556 807 IPR020568 -
Sto5g4351 947 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 559 946 - -
Sto5g4351 947 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 12 558 - -
Sto5g4351 947 CDD aeEF2_snRNP_like_IV 557 812 - -
Sto5g4351 947 PRINTS GTP-binding elongation factor signature 97 108 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 PRINTS GTP-binding elongation factor signature 61 69 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 PRINTS GTP-binding elongation factor signature 133 142 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 PRINTS GTP-binding elongation factor signature 15 28 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 PRINTS GTP-binding elongation factor signature 81 91 IPR000795 GO:0003924|GO:0005525
Sto5g4351 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 353 IPR027417 -
Sto5g4351 947 SUPERFAMILY EF-G C-terminal domain-like 808 906 IPR035647 -
Sto5g4351 947 Gene3D Translation factors 355 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4351 Sto-Chr5 52188527 52191622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4351 5 947 Eukaryotic Initiation Factors Gene Family AT3G22980 60.815 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4351 K14536 - gmx:100775257 1333.55