Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4288 ATGGAATCAAAGGGATTATTGAGAAGTGATGAGTTGTATGAGTATATTCTGGAGACTAGTGTGTACCCACGTGAGCCAGAGCCTCTCAAGGAGTTAAGACATGTCACTGAACAACACCCAAGGGCAATAATGGCTACTGCACCAGATGCTGGTCAGCTAATTGGCATGCTTCTGCAACTAGTAAATGCAAGAATGACTATTGAAGTTGGAGTCTTCACTGGATACTCCCTTCTACTCACTGCTCTCTCAATTCCTGAGGATGGAAAGATAACAGCAATAGACTTAAATCGCGAGTCATATGAATTTGGATTACCAATCATCAGAAAAGCTGGGGTTGAGCACAAGATTGACTTCATTGAGTCTGAGGCTTTGCCAGTTCTAGATCAGCTCTTGAAACATCATGACAATGAAGGGAGTTTTGACTTTGCATATGTTGATGCTGACAAAATCAATTACCAGAATTACCATGAGAGGCTAATGAAATTGGTGAAGGTGGGTGGAATAGTAGTCTATGATAATACACTTTGGGGAGGATCCGTAGCAATGAGTGATAAAGACACTCCAGAAAACAGAAAACAAGGAAGGCAACTCACAATAGAGTTCAACAAATTTGTTGCAGAAGATGATCGAGCCTATATTTCACATGCTCCATTAGGTGATGGCATCACCATCTGCAGGAGAATTGTCTGA 690 0.4145 MESKGLLRSDELYEYILETSVYPREPEPLKELRHVTEQHPRAIMATAPDAGQLIGMLLQLVNARMTIEVGVFTGYSLLLTALSIPEDGKITAIDLNRESYEFGLPIIRKAGVEHKIDFIESEALPVLDQLLKHHDNEGSFDFAYVDADKINYQNYHERLMKLVKVGGIVVYDNTLWGGSVAMSDKDTPENRKQGRQLTIEFNKFVAEDDRAYISHAPLGDGITICRRIV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4288 229 Gene3D Vaccinia Virus protein VP39 1 229 IPR029063 -
Sto5g4288 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 5 228 IPR002935 GO:0008171
Sto5g4288 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 227 IPR029063 -
Sto5g4288 229 CDD AdoMet_MTases 67 171 - -
Sto5g4288 229 PANTHER O-METHYLTRANSFERASE-RELATED 3 228 - -
Sto5g4288 229 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 3 228 - -
Sto5g4288 229 Pfam O-methyltransferase 18 228 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4288 Sto-Chr5 51704001 51706530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4288 2 228 Monolignol Biosynthesis Gene Families AT4G26220 72.687 1.48e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4288 K00588 - rcu:8265096 363.614