Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4284 atgataatatatatagcgGCGGTAGCGTGGGAGGCAGGGAAACCTTTGGTGATAGAAGAAGTAGAGGTGGCGCCACCACAGGCTGGTGAAGTGCGTTTGAAGATCCTCTTCACTTCTCTTTGCCATACTGATGTGTACTTTTGGGATTCCAagATCTTATCTGATCTTTTAATTTCTCATAACCTTGTAAGGATTGTGGAGAGCGTCGGGGAAGGGGTGAGAGACATGAAGGCAGGAGACAAAGTGCTTCCGGTGTTCACAGGAGAGTGTGGAGAGTGTGGGCATTGCCGGTCAGAAGAAGGAAGCAACCTGTGCGAGTTGCTTAGGATCAACACCGAGAGAGGCGTCATGCTGAGTGACGGGAAGACAAGATTCTCGAAGAATGGGAAACCCATTTATCATTTCCTTGGCACTTCCACTTTTGCTGAATACACTGTCCTTCATGCTGGATGTGTCGTTAAGATCAACCCTTCTGCTCCTCTTCACACTGTTTGCATCCTCAGCTGTGGGTTTTGTACCGGTTTTGGTGCTGCCGTGAATGTCGCAAAACCGAAGCCGGGTTCTACTGTCGCGGTTTTCGGACTCGGAGCCGTCGGCCTTGCtgtaagccttctacCCAAGAAGTTTGGAATCACTGACTTTCTGAACCCAAAAGATTATGACAAACCTATACAAGAGGTGATCTGTGAAATGACAAATGGAGGAGTTGATCGTGCTATTGAATGCACCGGAAACGTACAAGCATCCATCCAAGCATTCGAAAGTGTTCACGATGGATGGGGTGTTGCAGTGCTGGTTGGTGTGCCATCAAAAGATGCAGAATTCAAAACACATCCTCTCAAGTTCCTTCAAGAGAGGACACTTAAGGGCACTTTCTTTGGCAATTTCAAACCTCGCTCTCATCTTCCTTCCGTTGTTGAAAAGTACATCAACAaggAACTGGAAGTGGACAAGTTCATAACTCACACAATTCCATTCTCAGAAATAAACAAAGCATTTGAATATATGCTTACTGGCAAGTCCATCAGGTGCGTCATGAGCATGCAAGAGTGA 1053 0.452 MIIYIAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWDSKILSDLLISHNLVRIVESVGEGVRDMKAGDKVLPVFTGECGECGHCRSEEGSNLCELLRINTERGVMLSDGKTRFSKNGKPIYHFLGTSTFAEYTVLHAGCVVKINPSAPLHTVCILSCGFCTGFGAAVNVAKPKPGSTVAVFGLGAVGLAVSLLPKKFGITDFLNPKDYDKPIQEVICEMTNGGVDRAIECTGNVQASIQAFESVHDGWGVAVLVGVPSKDAEFKTHPLKFLQERTLKGTFFGNFKPRSHLPSVVEKYINKELEVDKFITHTIPFSEINKAFEYMLTGKSIRCVMSMQE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4284 350 Pfam Zinc-binding dehydrogenase 207 298 IPR013149 -
Sto5g4284 350 SUPERFAMILY GroES-like 299 346 IPR011032 -
Sto5g4284 350 PANTHER ALCOHOL DEHYDROGENASE 1 5 202 - -
Sto5g4284 350 PANTHER ALCOHOL DEHYDROGENASE 1 207 347 - -
Sto5g4284 350 Pfam Alcohol dehydrogenase GroES-like domain 29 155 IPR013154 -
Sto5g4284 350 SUPERFAMILY GroES-like 4 177 IPR011032 -
Sto5g4284 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 312 IPR036291 -
Sto5g4284 350 PANTHER ALCOHOL DEHYDROGENASE 207 347 - -
Sto5g4284 350 PANTHER ALCOHOL DEHYDROGENASE 5 202 - -
Sto5g4284 350 Gene3D - 288 348 - -
Sto5g4284 350 Gene3D - 174 203 - -
Sto5g4284 350 Gene3D - 206 287 - -
Sto5g4284 350 Gene3D - 11 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4284 Sto-Chr5 51678600 51683811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4284 30 316 Monolignol Biosynthesis Gene Families AT4G37990 24.127 1.18e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4284 K18857 - gmx:100800668 527.324