Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4271 ATGTCTGCTGTATCTGAAATTGTGAATCAGTTAGTAGGTGCAGCAATAAGCCAAGCTAATTATTGTTTTCACTTCAACCGGTATGTTAAAGACCTTGAAACCCAAAAAGAAAAGTTGCAATCCAAAATAGAAAGTGTTGTTGATCGTGCTAAAGAAGATAGGAAGAAAACTAAGACGACTATAACAAGTGTTGATGAATGGTTGAGTGAAGCAGACTCCCTCGCAGCAAAAGTGGTGGAGTTAGAAGAAAAGGTCAAACATAAAAGAATGAAGACATCTTGTCTTAATTATTGCCCTCCTAACTTGATTAGGCGTTATAGTCTTGCCAAAAAACTTGAAGAGATGACCAAGGAAATTGATGAGCATAATAACATTACATTTCCGGAATTTTCTCGAGTTGCATCACTTGTAGGCATGAACTACTATTCTTCGGATGGCTTCCTACACTTTGATAGTAGGAAGGAGGCTTATGGTAGACTTTTGGAGGCACTAAAAGATGATGAGACTCACATGATTGGATTGTATGGGATGGGCGGGTGTGGGAAAACGACTTTGGCAAAAGAAGTGGGTAAAGAAGCAGAACAACATTTCGGCAAAGTTGTCCTTGTGACTGTGTCTCAAGACatgaaagttgaaaaaattcaagaaagtaTTGCAAGCGAACTGGGTttggaattgaaagaaaaagaggaaccaGAGAGAGCTAAGCGCTTGTTCATGAGATTAACTAGTGGAGAAAGGTTTCTCTTAATTTTGGATGATGTTTGGGTACAACTTAATTTTGAGGCCATAGGAATTCCTACAGGTAAAAATCAAAAGGGTTGCACCATTCTTATAACTACACGACAATATGGTATATGCACTTCAATGAATTGCGGAAGAATAATTTCTTTAGAGGTTTTAAATGAGAAAGAAGCATGGGCTCTATTTCAAAAGCATGTTGAATTCTTTGATGACAACTCTGATAGCATAAAAGGTGTAGCAGAGGAAATTACAAAACAATGTGGTGGCTTACCGGTTGCAATTGCTGCTGTAGCTAGCACTTTGAAGGGAAAAGCACAATTTGAATGGGAGGAAGCATTAAACACATTGAAAGATTCAAATATATTGGAGATTGAAGAAGGTCTACGAAGTCCTTATGCTTGTCTTGAATTAAGCTACAATCAGTTGACGAATGAATCAGCTAGATCACTCTTCCTTTTGTGTTctgtatttccagaagattaTGAAATTTCAGAAGACCTCTTAACAAAAATTGGAATAGGCCTAGGGCTGGTTGAGGAATTTCAGTCTTATAAAAGGGCAAGGAACAATGTCCGCAAAGCGAAAAACAAGCTTACGGATTCTTATTTGCTGCTAAAAGTTGACAAAGCGAATAGAGTGAAAATGCATGACTTGGTTCGTGATGTAGCACTGTGGATAGCAAATAAAGAAGGCAAGTTGATCAAGGGACCAGAAAAGAGTCATGAACTAGAGTTTCTAATTATGAAGGACAGCCGGAGCAGGGTAAGGTATTTATGGCTTGATGAAGTGGATAAATTCCCACATGAGCTAGATTGTCCCGAACTAGAGTTTCTATTTGTTTCCACAAAGTCTGAGCATTGTGTGGATTTAACAAATGATTTTTTTACACGAATGAAGAAGCTCAGAGTTTTGTTTCTTAAGAATTCTTATCGAGACATTACATGCCTACAACTGCCAAAGCCAGAGCATTCGATAAATAATCTTCGTTGCCTAATCTTGGAAAGATGGACGTTAGGCGATTTCTCTTTTGTGAGAAGCCTAGGGAGGCTTGAGTCTCTTACTTTACAATATTGTTGCTTGGATGAATTACCAAGTTGTGTTATACATCAGAAGAAGTTGAAACTGTTAGATGTATGCAGGTGTgagattggaaggaatccttaTGAAGTGATTGGAAAATGCTCACAACTAGAAGAGTTGTACTTTGTTGATAATGGAGGAGCAGAATGGAAGGATCAAGATGAAAATTTTGCTAACTATTTTGATAAAGCGAGCAGCACTACACAGGAATTAGAGAGGTATTGTCTAAATTTGGGAAAGAGACCATATACTGTTCACAGGGAGGATTTTTCTGTAACAAGAAGTTTATCCGTTGACTATTTTGATACTTGCATCTCAAATGAAACAGTTAAGGACTTGATGCGTAGAGCACAAGTTCTTGCTTTGGATGGAATTCACAGAAGCTGCAAAAGTATCTTCCCCAGCATAGTTCAAATAATAGGGGGTGGGATGAATGATTTAACTAAGCTCTCACTCTACAAATTAGATGGGATAGAGTGCGTGACAAACACTAGAGATGATTTGGGTGTAGTTGGCACCTTGCCCAATTTGACTCACCTTTCTATAGAAAGCATGGAACATTTGAAAAGTGTGTGTTGTGGTCAGCCTCCTCAGGGCCATTTTGCAAAATTAAAAGAGCTCTGGATTTCTACTTGTGATTCACTTGAGcatataataacaacaacagaTGAAAGGAAGGAGATAGTAGCAGTAAACAGTGAGAGTGAGTATCAAAGGAGTTTGGGAGTTGCATTCTCACAATTGAAATATCTTAAGATCATTCGGTGCAATCAACTGGAAGATTTAATCCCTGTCTCTTTTGCTCACAGCCTTGCATGCTTGAAATCTCTAACTATACTGGAGGCTCGGAAATTGAAgtatgtatttgggcaatccgaggaTGAAGACCAGAATCCAAACAAGTTTCACATCATTCAGTTTTCTGCTTTAAGGATTCTTGATCTACATAACTTGCCAAATATTATTAGCATTTGTCCACAAAATTGTCATCTCACCTGGCCCTATTTGAGAACATTGGAATTGTCGAAATGTCCACAGCCAAGCATCTTATTTGGATCGAGCCCAGAGGATCTCACAGACTCGGAGGATCTAATGAAGACGATGGTGActtatttagaaaatttaaaatccgTTTCACTACGGTACCATGTGAAAATAGATGTTATTTTCTCCACGGAATGGTTTCCTATAAATGGGCTAGTAGTAAATTCAGGCTTGCAAAGCATTGAGTTGATTAATCTACCCGAGTTGAGGCATATATGGATGAGTCCCAAAAATTTCATTGGCATTCAAAATCTTGTTGAATTAATCATTCAAAAATGTGGAAACTTGAAAGTTATCTTCCAAAAATCCGTATTGAGAAGCATACCGCAATTGAAGACACTGAGTATCGAGAATTGtgaggaattggaggaaatctttgaagaagaagaaaatcagAATGTGTCAAATCCTCAACTTCTCTTCCCACATCTAACCACAATCATCATCCAACATTGCCATAAGTTGAAACACCTATTCCCTGTCTCCACATCCCATGTGCTTCCAAAACTAGAGACTTTATGGATAGAAGAAGCATCCCAACTGGAGCAAGTATTTGGACATGAAGAAGAAGACACAAGAGACAGAATTAGAAAAGAGGCTTTGAAGATGACTCCACCATTAAAACTCCTAGTTCTTGTTAAACTACCCTCACTCAATATCAGGGGCCAATGGATTAGTGAGTTACAAACAGTGAGATACCATTTTGTGCATGAATCTCCAAAACTCAATTGGACTTCAACTCAAGATCTTGAGGACTTGCGTGAAATGTTAAGAGATGAAGAAGgtgaTTTCCAGAATATGTCTTGGCGGGTAGAAGGTTTATTGGTTCAACTTAATAAATCCATTGAAGATCCAAGTAAAGAAACCACCAATCAAATTCATAGAAAAGAAACTGGAGTTGAATTAGCATTAGAAGAGGCTTTTGAGCATCTTTTAAATAGTGGTATTATCCATTTTGAGCCGAAAATGGCTTCCTTAAACTTGACAAAGAGTCTCAATGAAACAACAAAAGACACTGATGTAGAACTGCTTGGTTCAGAGGTACCTTCAGTGACGGAAACTTCATCAAACAATCCTTCACATATTTCTCTGCACAGAACAGCTTCACATGAAACTgaGTTGGTGAATGAAATATCAGCAAATGAACCGAGATTGATGGATCAAAAACAACAACTACAACAGCCACTTGGACAATATGAAATTTCTGATATTCAAATTCCTCAGCTTATTAAAAATGTTAAAACAAGTGTTGAAGAAAGTTCCACACAGGAAAATGCTGGGACAGTTATTTCTCCTCCTAAGGCATTTCTACATAGTGTTAACAAGCTAGAAGAACAAAATGTTGAAGAGGGAAATATATCAGAGAAAaggAGTGTTATAGGATTTACTGAAGCAAGCTCCTCATTGAAGAATGCTGAGACAGTTACTTCAACAAGTCCATTAAATACTACTTTGCCTAAAGCACCTTCATATAGACAaatcaaggtcaaccatactGAAGCAAACATTGACAAAGACACTGAAACCAATCCTTTAACAAATCTTGAAGACCTTGAAGATGATGATCTCATTAGATTGTTTCAATCTCTAGAGGAAGATGATGGTGGTCAATTGCCAATACCATCTGTTCCTATTCTTGCTACCACAAAAGATGAGCTTGTGGCAAAGGCCCTTACAGACTTGGAAGTCTGCTTGAAGATGCCTCTTAAGGACATAGCAAGCTCACAGGCCAATAGCCTTCGCCTTCACACATCTCTCAACTTCTTGTCTCGCCTTTCGTTAGAAGATGGAGCTCTATCTGATGGACTTAAAGCTATAATACACTCTTTGCACCAAGAGTTTCCGAGCATGTTGTGTTCTTTCAAGCAAGCCTTTGGTAAAATCAACAAATTTTCAGTGCTTGATGAAAGAGATAAATGTATGAAGGAAGAATTGGCTCGCCGGAAGGAGGCTGCCCTTTCTCTTGTTTCCAAAATGTCCGAAACCAGGAAGTTTATGAGTGAAGCTCAAGAGAAGGAAGCGAGGTTAAAGGAACATATGTCGAGGTTGGAGAAAGAAATACAAGATTGTGAGGCTGAGCTGTTGTGTCTTGACgagcaaaagaagaaaagtgTTGCAGAAACTAAAGAGTTGAAGAAAGAGTTTGAGAGTGTGAAGAAAGAAAAGGCCGAAATGGTGGAAGATGAAGGAAAAACTCGGCAACAATTGTTTCAGGTTGATTATAAATGGTCGGTCTTGTGTAGCCAGTTTCAACAAAACAACATTGATGCTAGCTAG 5145 0.3668 MSAVSEIVNQLVGAAISQANYCFHFNRYVKDLETQKEKLQSKIESVVDRAKEDRKKTKTTITSVDEWLSEADSLAAKVVELEEKVKHKRMKTSCLNYCPPNLIRRYSLAKKLEEMTKEIDEHNNITFPEFSRVASLVGMNYYSSDGFLHFDSRKEAYGRLLEALKDDETHMIGLYGMGGCGKTTLAKEVGKEAEQHFGKVVLVTVSQDMKVEKIQESIASELGLELKEKEEPERAKRLFMRLTSGERFLLILDDVWVQLNFEAIGIPTGKNQKGCTILITTRQYGICTSMNCGRIISLEVLNEKEAWALFQKHVEFFDDNSDSIKGVAEEITKQCGGLPVAIAAVASTLKGKAQFEWEEALNTLKDSNILEIEEGLRSPYACLELSYNQLTNESARSLFLLCSVFPEDYEISEDLLTKIGIGLGLVEEFQSYKRARNNVRKAKNKLTDSYLLLKVDKANRVKMHDLVRDVALWIANKEGKLIKGPEKSHELEFLIMKDSRSRVRYLWLDEVDKFPHELDCPELEFLFVSTKSEHCVDLTNDFFTRMKKLRVLFLKNSYRDITCLQLPKPEHSINNLRCLILERWTLGDFSFVRSLGRLESLTLQYCCLDELPSCVIHQKKLKLLDVCRCEIGRNPYEVIGKCSQLEELYFVDNGGAEWKDQDENFANYFDKASSTTQELERYCLNLGKRPYTVHREDFSVTRSLSVDYFDTCISNETVKDLMRRAQVLALDGIHRSCKSIFPSIVQIIGGGMNDLTKLSLYKLDGIECVTNTRDDLGVVGTLPNLTHLSIESMEHLKSVCCGQPPQGHFAKLKELWISTCDSLEHIITTTDERKEIVAVNSESEYQRSLGVAFSQLKYLKIIRCNQLEDLIPVSFAHSLACLKSLTILEARKLKYVFGQSEDEDQNPNKFHIIQFSALRILDLHNLPNIISICPQNCHLTWPYLRTLELSKCPQPSILFGSSPEDLTDSEDLMKTMVTYLENLKSVSLRYHVKIDVIFSTEWFPINGLVVNSGLQSIELINLPELRHIWMSPKNFIGIQNLVELIIQKCGNLKVIFQKSVLRSIPQLKTLSIENCEELEEIFEEEENQNVSNPQLLFPHLTTIIIQHCHKLKHLFPVSTSHVLPKLETLWIEEASQLEQVFGHEEEDTRDRIRKEALKMTPPLKLLVLVKLPSLNIRGQWISELQTVRYHFVHESPKLNWTSTQDLEDLREMLRDEEGDFQNMSWRVEGLLVQLNKSIEDPSKETTNQIHRKETGVELALEEAFEHLLNSGIIHFEPKMASLNLTKSLNETTKDTDVELLGSEVPSVTETSSNNPSHISLHRTASHETELVNEISANEPRLMDQKQQLQQPLGQYEISDIQIPQLIKNVKTSVEESSTQENAGTVISPPKAFLHSVNKLEEQNVEEGNISEKRSVIGFTEASSSLKNAETVTSTSPLNTTLPKAPSYRQIKVNHTEANIDKDTETNPLTNLEDLEDDDLIRLFQSLEEDDGGQLPIPSVPILATTKDELVAKALTDLEVCLKMPLKDIASSQANSLRLHTSLNFLSRLSLEDGALSDGLKAIIHSLHQEFPSMLCSFKQAFGKINKFSVLDERDKCMKEELARRKEAALSLVSKMSETRKFMSEAQEKEARLKEHMSRLEKEIQDCEAELLCLDEQKKKSVAETKELKKEFESVKKEKAEMVEDEGKTRQQLFQVDYKWSVLCSQFQQNNIDAS 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4271 1714 Gene3D Ribonuclease Inhibitor 513 843 IPR032675 -
Sto5g4271 1714 CDD AAA 153 281 - -
Sto5g4271 1714 PANTHER - 4 1088 - -
Sto5g4271 1714 Coils Coil 64 91 - -
Sto5g4271 1714 Coils Coil 1622 1684 - -
Sto5g4271 1714 Gene3D Ribonuclease Inhibitor 844 972 IPR032675 -
Sto5g4271 1714 Gene3D Ribonuclease Inhibitor 973 1151 IPR032675 -
Sto5g4271 1714 SMART AAA_5 168 320 IPR003593 -
Sto5g4271 1714 Coils Coil 425 445 - -
Sto5g4271 1714 Pfam NB-ARC domain 157 388 IPR002182 GO:0043531
Sto5g4271 1714 Gene3D - 300 382 IPR042197 -
Sto5g4271 1714 SUPERFAMILY L domain-like 462 1133 - -
Sto5g4271 1714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 402 IPR027417 -
Sto5g4271 1714 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 4 1088 - -
Sto5g4271 1714 PRINTS Disease resistance protein signature 171 186 - -
Sto5g4271 1714 PRINTS Disease resistance protein signature 242 256 - -
Sto5g4271 1714 PRINTS Disease resistance protein signature 335 349 - -
Sto5g4271 1714 PRINTS Disease resistance protein signature 913 929 - -
Sto5g4271 1714 Gene3D - 143 296 IPR027417 -
Sto5g4271 1714 Coils Coil 1068 1088 - -
Sto5g4271 1714 Gene3D - 383 472 IPR036388 -
Sto5g4271 1714 Coils Coil 29 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4271 Sto-Chr5 51418631 51425705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4271 172 483 WRKY Transcription Factor Family AT5G45050 25.159 3.29e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4271 - - lang:109340689 760.755