Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4270 ATGGACATTGCACTCTCTGTTGTAACTGATATTGTGAGTAAGTTAGTAGATACAGCAATACGGCAAGCTCGTTATTCTTTCCAGTTCAACAAGTATGTTAATgatcttgaaaaagaaaaagcgaACTtgcaattaaaaatagaaagtatTCTTAGCCGTGCTCAAGAAGCTAAGAAGAAAACTGAAAAAACCGTTAGTGTTGTTGATGGTTGGTTGAGTAAAGCCGACTCTCTCATGGAAGAAGTGTTGGAAATGGAAGAAAAggcaaagaaaagaaacaaggcATCTTGTCTTAAGTGTTGCCCCAACTGGGTTAACCGTTATGGTTTAGCCAAAAAGATTGAAGAGAAAATCAATGAAATTATAGAGCACAAGGAAAAAGATTTTCCTGAGTTTTCTCGACTTGCTACACTCATAGGCATGAATTATTTTTCTGCGGAAGCTTTTGTACACTTCAATAGTAGAAAGGTGGCTTGTGATGGACTTTTGGAGGCACTAAAAAATGATAAGGTTCGCATGATTGGATTGTGGGGAATGGGTGGGTGTGGTAAGACAACCTTGGTAAAAGAAGTGAGTAAAGAAGCtgagaatttttttgacaaagtTGTCTTTGTTACTGTGTCTAATACCATTCAGGTTCGAAGTATTCAAGGTAAAACTGCAAGCCAACTGGGTTTAAAAttagaagaggaagaggaaacaGAGAGAGCGAGACGGTTGTTCATGAGATTGAATGGTGGAGAAAGGTTTCTCATAATTTTGGATGATGTATGGGAAATGCTTGATTTTGAGGCCATAGGAATTCCTGTaggtgaaaataaaaatgggtgCACTGTTCTTATAACTACACGAGAACGCCGTGTTTGTACTTCGATGAATTGCCAAAGTATAATTGGCCTTGAAATCTTGAATATGGAAGAAGCATTGACTCTATTTCAAAAGCATGCACAATTATTTGATGAAAACTCTGAAACCAAGAAGTTGAAGGTTTTGGCAGAGGACATTACAAAAGAATGTGGTGGTTTACCGGTTGCAATTGCTGCTGTGGCTAGCTCTTTGAGGGGGAAAACTCAAGCTGAGTGGGTTGAAGCATTGGAGACATTAAGAGATTCTAGTCCAGTGGATATTGGAGAAGGTTTAAAAAATCCTTATACATGTCTTCGACTAAGCTATGATAATCTAAAGAATGAGGTAGCTAAATCACTCTTTCTGTTGTGTTCtgtgtttccagaagatcaTGAAATTGCCATTGATGTTTTAGCTATATTTGGCATAGCACTAGGATTGATTGGAGAAATCCACTCTTTGAAAAGGGCAAGGAACCAAGTGAGTATTGCCATAAATAAGCTTGTAGATTCTTGTTTGTTGTTGGGAGATAAAGAAAAAGGTGTCATTAGCATGCATGACTTGGTTCGTGATGTGGCCTTATGGATAGCAAAAAACGAGAATAAGATGATTATGGGACCAGAAAGGAGTCAAAAGGTGTTAAAAGTGGATATGATTTTAAAGGACAATACCATAAGATATTTGTGGCTTGAGGGAGTTGATAAATTTCCTCATGAGTTGGATTGTCCAAACCTTGAGTTTCTTCGTATTTCCATAGAGTCAAAGCATGGTAAGTATGTAACAAATGAGTTTTTGAATGGACTCAAGAAACTTAAAGTTTTATTTCTTGAACATAAATCTTTTGGTAAACAACAAGTCCTAGAATTGCCCAAGTCAATCCATTCGATAAATAATCTTCGTTACCTATTGTTGGATGGGTGGATATTAGGTGACATCTCTTTGTTAGAAAGCTTAGAAAGACTTGTATCTTTGACATTAAGGTTGTGTTCCTTCGATGAATTACCAAAAAGTATATCAGAACAAAAGAATTTGAGATTGTTACATATCTCAAATTGTGAGATTAAGAGAAATCCTTATGAAGTGATTGGAAGATGTTCACAACTGGAAGAATTGTATTTTTATGGTAACGGTGGCGAAGACTGGGAGGATAAAGGGGAAAATGCTGTTGAATTCTTTGATAAAAATTGTGCTACACTTGCATTGGAAAGGTACAATGTTGGTATTGGGCAGTTTTATCTACAAGTTTATTCCAAAGAAGTTCGTTCGACTATGAAAAGAGTTGTATCTGTGGGAGATTTTGAGAGTTGCATCTCAAATGAAACAATTAGAGATCTAATGCAAAGAGCGCAGGGTGTTTCTTTGGCAAGAATCAGTAGTTGTAAAAATTTTGTCCCTAGCAGTGTTGAAAGAATAGGAGGGGATATGAATGAATTGACCATACTTGAACTCCGTGATTCAGATGGGACAGAGTATGTGATAGATATTCCTAATCATTCGGCTTTGGGTCTTGTTAGAATCATCTCTAATTTGACACAACTACATATATCAGGATTGAAGAATTTGAAAACCTTGTGCAATGGTCGTCCTCCTCAGGGCCTTTTTGCAAACTTGGAGATTCTAGTTGTACAGAAATGCAATTCCCTTGAGCATATTATAACAGATGAAGTGGAGGAGATAGTTGAAGATGACAATGAATATCAAAGGAACTATActcttgcattcccaaatttgAAAAAGATTGATATCAAGGAGTGCAATCAACTGGAGTACATATTCCCAAGCTCTTATACTCTGAGCTTGCCACAATTGAACGTTTTAACAATACGTGGTGCTGCTAAATTGAAGAATCCAATTGTGTTTCAGAGCATTGAATTGCTTGCTTTAAGAGAGCTAACACTCTATAACTTGCCAAATATCATCAGCATTTGTGCAGAAAATTATCATCCAAGATGGCCTTCTTTGGAAAGCTTGGACTTGAGGAATTGTCCACTATTAACCACCATGTCTGTGAGCAATCATAGCATCCCCCACTCTGGATTGATACAACAACATACAGCAGCAAAGGATGGAAAGGAAATACATATGGAGATGTTGAAAGAAATCGTACCGGTAGGCTTTAACATAGATGTTCTTTTCTATGTCGAAGGACTAGAAATGAACTCAGTCTTACAATGGCTTATATTGGAAGATCTACATGAGTTAAGGCATATATGGATAGGTCCTAAAAACGTATTACAACTTCAAAATCTTAGTTTTTTGAAAATTGTGAAATGTGAAATTTTGAAAGTTGTCTTCACTGCAACCATTTCAAGAAGCCTTCCACAGTTAAGGAAGGTGATCATCGTGGATTGTAAGGAATTGGTGGAAatcattgaagaagaagaagaaagtcaaAAGGTGTCAAGTCCCCAACTTGTCTTCCCAAATATAGGCATAATCATCATCAGACATTGCCCTAAGTTGAAACGTGTATTTCCTGTGTGCACATCTCTTGCACTTCCAAAATTAAAGGCCTTGTGTATAGAAGAAGCGTCCCAACTAGAGCAAGTATTTGGAAACGAAGCACAAGAAAAAATGGAAGGTGTGATGATTCCAAATTTGAAATATGTAGTACTTGTGAAGCTGCCAAGACTGAAGATGGGGCCCCAATTGATTGGGTTGCAAACTGTGAGATACCTTCTTGTGCAAGATTCACAATACATCAATTTCACTTCCACTGTTGCTACTCTTGAGGATTTGCATAAAATATGCAAAACTGAGATAGctgacaaatataataatgaagTCTGGTATTTAGAGTATTACTTGGAAAAGATTATTCAATCCAATGAAGATTCTAGCGAAGAAATCACTAAAGAAATTGAAAGCAAGGGAACTCATGGAGTTGAAGCAGCTTCAGAGATTGTGGATATTTCTTCACAAGTTGAAACTAATCAAAATAATAGTGGCACTCAGTTAGAGCAGAAATTGACACCCGTTGCTTCATCAAACATGACAGagAATCAAAACAAAGCAACAAAGGAGTGTACTGGAGAAATGCCTGGTTTAGAACCTGTAGCTATGGCAACATCATCAACAAATCCTTTAGAGTTGGTGGATGAAATATCAACAAGTAAACCAAGTTTGGTAGGCCAAAAACAGCCACTTGCAGAAAATGAAATTCCTCTAGCAACTAAAAGTGTTAACAAGCTAGAAGAACCAAGTGTTGAAGAGGGAAATATATCAGAGAATAAGAGTGTTAAAAGATTTACTGAAGGTTCTATATTGAAGAATGCTGAGATAGTTACTTCATCAGCTCCTTCAGAGCCAACAAGCTTATTCCCTAGTCCATTAGTTACTACTTTTTCCAAAGCACTTATACAAgaggaagaagatggtgGTCAATTGTCAATACCATCTATTCCTATTGTTGCTGCTATAGGAAAAGACCTTGTGGGAAAGGCCCTTGCAGACTTGGAAGTCTCCTTGAAGATGCCTCTTAAGGACATAGCAACCTCAGAGGACAATAGTCTTCGCGTTCTGACAACTCTCAACTTCTTGTCTCGCCTTTCCGTTGAAGATGGAGCATTATTACCCCAAGGACTCAAAGCTATAATAAAGTCTCTGCACCAAGAATTGCCAAGCATTCTATATTCTTTCAAGCCAGCCTTAGCTATGATCAACAAATTTCATGAAGCTCAAGAGAAGGAAGCTAGGCTGATGGATCAGATCTCTATGTGGGAGAAAGAAATAGAGGATTGTGAGGCTAAGCTATCGTCTCTTCAAGAGCAAAAGAAGACATGTGTTGCAGAAGCTACAGAATTCAAGAAAGAGTATGAGAGTGTGATGAAAGAAAATATTGAAATGGTGGAAGATCAAAGAAAAGCTTGGCAACAATTGTTTGATGTTGATTATAAATGGTCAGTTCTGTATAGTCAATTTCAGCAAAACAATATCGATGTGCATACCCGTCGAACAATACATTCTACGTTTGAAAATGTAATTGAAACCAATGAAGATTCTGGATTTCAAAACTTGGCACTTGTTGCTGCACCAAACTTGACTGAGAGTCTCAATGAAACAACAATTGGCTTAGAGATACCTGCAGccatggaaacttcacatgaaACTGAGTTGGTGGATAGAAGATCAGCTATTGAACCAAGTTTGACAGATCAACAACAGCCACTTGGAGAATTTGAAACTGCTAATAATGAATTTTCTCATGAAACTAAAAGTGATAACACGGTAGAAGATGAAGACCAAAGTGCTAAAGAAGGAAATATATCAGAGGAAACGAGAATTATTAAAGGAAATATTGAAGAAGGTTCTACTTCTACATCAAAGAATGCTAAAGCATTTCCACATAGTCAACTGAATATCAATCAATCAGTTGCTATTGCCGGTACCACCAAAGATGAACTTGTGAGAAAGGCCATTTCAGACATGGAAGTTTCTCTGAAGATGCCACTTAAGGACATAGCAACCTCAAAAGACAATAGCCTCCGCCTTCTAACCGCTCTCAACTTCTTGTCTTGCCTTTCCTCGGATGAGGGAGCTCTACCTCATGGACTTAAAGCTATAATAGACTCTTTGCACCAAGATTTTCCAAGTATTCTGTGTTCTTTTAAGTCATCCTGTGCTAAAATCAACAAATTTCCCAAGTTTGAGGAACATATCTCTAAGTTGgacaaagaaataaaagattGTGACAAGAAGTTATCGTCTgttgaagagaaaaagaagaaatatgtTGCAGAAACCATAGAGTtgaagaaagagtttgaaagtATTAGAAAAGACAAGTCTGAAATGGAGGAACATCAAGGAAAAGctcaacaacagatatttcaggATAAATATAAATGGTCCTTCTTATGTAGCCAATTTCAGCTGAACAACATTGATGCTAGAAATCTTGGTTAA 5751 0.353 MDIALSVVTDIVSKLVDTAIRQARYSFQFNKYVNDLEKEKANLQLKIESILSRAQEAKKKTEKTVSVVDGWLSKADSLMEEVLEMEEKAKKRNKASCLKCCPNWVNRYGLAKKIEEKINEIIEHKEKDFPEFSRLATLIGMNYFSAEAFVHFNSRKVACDGLLEALKNDKVRMIGLWGMGGCGKTTLVKEVSKEAENFFDKVVFVTVSNTIQVRSIQGKTASQLGLKLEEEEETERARRLFMRLNGGERFLIILDDVWEMLDFEAIGIPVGENKNGCTVLITTRERRVCTSMNCQSIIGLEILNMEEALTLFQKHAQLFDENSETKKLKVLAEDITKECGGLPVAIAAVASSLRGKTQAEWVEALETLRDSSPVDIGEGLKNPYTCLRLSYDNLKNEVAKSLFLLCSVFPEDHEIAIDVLAIFGIALGLIGEIHSLKRARNQVSIAINKLVDSCLLLGDKEKGVISMHDLVRDVALWIAKNENKMIMGPERSQKVLKVDMILKDNTIRYLWLEGVDKFPHELDCPNLEFLRISIESKHGKYVTNEFLNGLKKLKVLFLEHKSFGKQQVLELPKSIHSINNLRYLLLDGWILGDISLLESLERLVSLTLRLCSFDELPKSISEQKNLRLLHISNCEIKRNPYEVIGRCSQLEELYFYGNGGEDWEDKGENAVEFFDKNCATLALERYNVGIGQFYLQVYSKEVRSTMKRVVSVGDFESCISNETIRDLMQRAQGVSLARISSCKNFVPSSVERIGGDMNELTILELRDSDGTEYVIDIPNHSALGLVRIISNLTQLHISGLKNLKTLCNGRPPQGLFANLEILVVQKCNSLEHIITDEVEEIVEDDNEYQRNYTLAFPNLKKIDIKECNQLEYIFPSSYTLSLPQLNVLTIRGAAKLKNPIVFQSIELLALRELTLYNLPNIISICAENYHPRWPSLESLDLRNCPLLTTMSVSNHSIPHSGLIQQHTAAKDGKEIHMEMLKEIVPVGFNIDVLFYVEGLEMNSVLQWLILEDLHELRHIWIGPKNVLQLQNLSFLKIVKCEILKVVFTATISRSLPQLRKVIIVDCKELVEIIEEEEESQKVSSPQLVFPNIGIIIIRHCPKLKRVFPVCTSLALPKLKALCIEEASQLEQVFGNEAQEKMEGVMIPNLKYVVLVKLPRLKMGPQLIGLQTVRYLLVQDSQYINFTSTVATLEDLHKICKTEIADKYNNEVWYLEYYLEKIIQSNEDSSEEITKEIESKGTHGVEAASEIVDISSQVETNQNNSGTQLEQKLTPVASSNMTENQNKATKECTGEMPGLEPVAMATSSTNPLELVDEISTSKPSLVGQKQPLAENEIPLATKSVNKLEEPSVEEGNISENKSVKRFTEGSILKNAEIVTSSAPSEPTSLFPSPLVTTFSKALIQEEEDGGQLSIPSIPIVAAIGKDLVGKALADLEVSLKMPLKDIATSEDNSLRVLTTLNFLSRLSVEDGALLPQGLKAIIKSLHQELPSILYSFKPALAMINKFHEAQEKEARLMDQISMWEKEIEDCEAKLSSLQEQKKTCVAEATEFKKEYESVMKENIEMVEDQRKAWQQLFDVDYKWSVLYSQFQQNNIDVHTRRTIHSTFENVIETNEDSGFQNLALVAAPNLTESLNETTIGLEIPAAMETSHETELVDRRSAIEPSLTDQQQPLGEFETANNEFSHETKSDNTVEDEDQSAKEGNISEETRIIKGNIEEGSTSTSKNAKAFPHSQLNINQSVAIAGTTKDELVRKAISDMEVSLKMPLKDIATSKDNSLRLLTALNFLSCLSSDEGALPHGLKAIIDSLHQDFPSILCSFKSSCAKINKFPKFEEHISKLDKEIKDCDKKLSSVEEKKKKYVAETIELKKEFESIRKDKSEMEEHQGKAQQQIFQDKYKWSFLCSQFQLNNIDARNLG 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4270 1916 Pfam NB-ARC domain 162 393 IPR002182 GO:0043531
Sto5g4270 1916 PRINTS Disease resistance protein signature 173 188 - -
Sto5g4270 1916 PRINTS Disease resistance protein signature 244 258 - -
Sto5g4270 1916 PRINTS Disease resistance protein signature 339 353 - -
Sto5g4270 1916 PRINTS Disease resistance protein signature 854 870 - -
Sto5g4270 1916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 406 IPR027417 -
Sto5g4270 1916 Gene3D - 144 298 IPR027417 -
Sto5g4270 1916 Gene3D Ribonuclease Inhibitor 983 1179 IPR032675 -
Sto5g4270 1916 Gene3D Ribonuclease Inhibitor 853 982 IPR032675 -
Sto5g4270 1916 PANTHER - 6 1081 - -
Sto5g4270 1916 MobiDBLite consensus disorder prediction 1714 1730 - -
Sto5g4270 1916 Gene3D Ribonuclease Inhibitor 501 844 IPR032675 -
Sto5g4270 1916 Gene3D - 391 476 IPR036388 -
Sto5g4270 1916 Coils Coil 1505 1553 - -
Sto5g4270 1916 SUPERFAMILY RNI-like 980 1130 - -
Sto5g4270 1916 Coils Coil 75 95 - -
Sto5g4270 1916 Coils Coil 1835 1869 - -
Sto5g4270 1916 SMART AAA_5 170 322 IPR003593 -
Sto5g4270 1916 MobiDBLite consensus disorder prediction 1678 1730 - -
Sto5g4270 1916 Gene3D - 302 390 IPR042197 -
Sto5g4270 1916 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 6 1081 - -
Sto5g4270 1916 CDD AAA 162 283 - -
Sto5g4270 1916 Coils Coil 33 60 - -
Sto5g4270 1916 MobiDBLite consensus disorder prediction 1680 1713 - -
Sto5g4270 1916 SUPERFAMILY L domain-like 467 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4270 Sto-Chr5 51402229 51409972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4270 171 504 WRKY Transcription Factor Family AT5G45050 25.581 1.42e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4270 - - lang:109340689 796.193