Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4262 ATGGAGATAGAGGAAGAATCAGAGAGAAGTGTGTGTGGTGGAGGGAGAGAATTAGGAGAGAGGGGATTGTGTGTGGTGTGGGAGGATTTGTGTGTTGTGGTTCCAAATTTTGGGAATGGACACAGCAAGAGGTTGCTTGATAGGTTGAGTGGTTATGCTGAGCCAAACAGAATCATGGCTATTATGGGACCTTCTGGCTCTGGGAAATCCACTCTTCTTGATGCTTTGGcagGTAGGCTTCCTAGAAATGTTGTCATGACAGGAAATGTGCTTTTaaatggaaagaagaagagattaGACTATGGAGTTGCAGCTTATGTGACCCAAGAAGACACACTTTTGGGAACACTAACAGTGAGAGAAACACTATCATACTCAGCAAATCTAAGGCTTCCATCCACCATGACAAATCAAGAAATAACTGAAATTGTGGAAGGGACCATTATGGAAATGGGTCTTCAAGATTGTGCTGATAGGCTTATTGGGGTATGGCACTTGAGAGGGATAAGTGGTGGTGAGAAGAAAAGACTAAGCATAGCACTTGAAATCATCACAAGACCCACCCTCTTGTTCCTTGATGAACCCACCAGTGGGCTGGATAGTGCCTCTGCATTCTTTGTGGTGCAGACTCTGAGGAATATAGCTCATGCTGGAAGAACTGTTATCTCTTCCATTCATCAACCTAGTAGTGAGGTTTTTGCTCTCTTTGATGACCTTTTCCTGCTTTCTGGGGGTCAGACTGTGTACTTTGGAACAGCCAAAAATGCACTTGAGTTCTTTGCCAAAGCTGGGTTTCCATGTCCAAGCAGAAGAAATCCTTCTGATCACTTCCTCCGTTGCATTAATTCAGACTTTGATACTGTCACAGCCACTATGATAGCCTCTCAGAAAATTCCTGAACAAGAATCATTACCAACTGCAGAAATCAAAGCAAGACTTATTGAGAAGTACAAATGGTCAGAGTATGCAACCACAGCAAGAGCAAGAATCAAAGAAATCCTGAATCTTGGACAAGAAGAGAATATTGAAAGTAAAAGCAAGGGGAAGAAGGAGCAAGCCAAATGGTGGAAGCAGCTTTCAACATTGAGTGAGAGATCTTTTGTGAACATGTGTAGAGATGTTGGGTACTACTGGATAAGGATAGCAATTTATGTGGCCTTATCTCTCTGTGTTGGAACTGTGTTTTCCAATGTTGGAACAAGTTATAGAGCAATCTTTGCAAGAGGATCATGTGGAGCATTCATTTCTGGATTCATGACATTCATGTCAATTGGAGGCTTTCCATCCTTCATAGAGGAGATGAAGGTGTTTAAGAAGGAAAGGCTGAATGGGTATTATGGAGTTGCTGTGTATGTGGCATCAAATTTTGTGTCTTCCTTTCCCTTTGTGGCAGTAATGTCCATTGCTACAGGAGTTATAACAACATTTATGGTTAAGTTTGGTCATGGATTTTTCCATCTCTTTTATGCATGCCTTGATCTTTTTGCCTGCATTGCTGTTGTGGAGAGCTCAATGATGGTTATAGCTTCAATTGTCCCTAACTTCTTGATGGGAGTCATTATTGGAGCAGGATATATGGGTGTTATTATGATGACTTCTGGCTACTTTCGTCTGCGCCCTGAACTTCCCAAAATTTTCTGGCGCTATCCAATTTCATACATCAATTTTGGAGCATGGGGATTACAGGGAGCTTACAAGAATAGCATGCTTGGAGTGGAGTTTGATCCACTGGTTCCTGGTGACCCAAAACTGAAAGGAGAAGTGATTCTGAAAACTATGCTTGGAATGCAAGTTGATCACTCCAAATGGTGGGATTTGGCTGCTGTTATACTCATTCTCATAGTCCTCAgacttcttctcttcttcactcTCAAGTTCTGTGAGAAAGCCTTACCTTTCCTTCATAAAATCTACATCAATCACACTCTCCAACGTCTCCAAAAGCGTCCTTCTTTCAGAATACCTCCATTCCCTTCCTCCAGGCACTACCAACATCCATTGTCCTCTCAAGAAGGTCTCAACTCTCCTATTCACtag 2037 0.4134 MEIEEESERSVCGGGRELGERGLCVVWEDLCVVVPNFGNGHSKRLLDRLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLPRNVVMTGNVLLNGKKKRLDYGVAAYVTQEDTLLGTLTVRETLSYSANLRLPSTMTNQEITEIVEGTIMEMGLQDCADRLIGVWHLRGISGGEKKRLSIALEIITRPTLLFLDEPTSGLDSASAFFVVQTLRNIAHAGRTVISSIHQPSSEVFALFDDLFLLSGGQTVYFGTAKNALEFFAKAGFPCPSRRNPSDHFLRCINSDFDTVTATMIASQKIPEQESLPTAEIKARLIEKYKWSEYATTARARIKEILNLGQEENIESKSKGKKEQAKWWKQLSTLSERSFVNMCRDVGYYWIRIAIYVALSLCVGTVFSNVGTSYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKKERLNGYYGVAVYVASNFVSSFPFVAVMSIATGVITTFMVKFGHGFFHLFYACLDLFACIAVVESSMMVIASIVPNFLMGVIIGAGYMGVIMMTSGYFRLRPELPKIFWRYPISYINFGAWGLQGAYKNSMLGVEFDPLVPGDPKLKGEVILKTMLGMQVDHSKWWDLAAVILILIVLRLLLFFTLKFCEKALPFLHKIYINHTLQRLQKRPSFRIPPFPSSRHYQHPLSSQEGLNSPIH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4262 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 269 IPR003439 GO:0005524
Sto5g4262 678 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524
Sto5g4262 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 22 672 - -
Sto5g4262 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 672 - -
Sto5g4262 678 Pfam ABC-2 type transporter 226 301 IPR043926 GO:0140359
Sto5g4262 678 Gene3D - 20 264 IPR027417 -
Sto5g4262 678 Pfam ABC transporter 46 197 IPR003439 GO:0005524
Sto5g4262 678 Pfam ABC-2 type transporter 358 567 IPR013525 GO:0016020|GO:0140359
Sto5g4262 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 264 IPR027417 -
Sto5g4262 678 SMART AAA_5 55 245 IPR003593 -
Sto5g4262 678 MobiDBLite consensus disorder prediction 659 678 - -
Sto5g4262 678 CDD ABCG_EPDR 25 251 - -
Sto5g4262 678 MobiDBLite consensus disorder prediction 662 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4262 Sto-Chr5 51321516 51331760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4262 57 262 Calmodulin-binding Proteins AT2G36910 30.698 5.22e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4262 K05681 - gmx:100806806 1016.91