LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g4261	TTGGTGTGGGAAGATCTGAGGGTTGTGCTGCCTAATTTTGGGAAGGGGCCTACCAAGAGGTTGCTTAATGGGCTCAATGGGTATGCTGAGCCTGGTAGGATTATGGCTATCATGGGCCCCTCTGGCTCTGGGAAATCTACCTTGCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACTGGAAATATATTTCTCAACGGAAAGAAGAAAAGACTAGATTATGGTGCAGTTGCTTATGTAACTCAAGAGGATGTTTTGCTGGGAACTCTCACTGTCAGGGAGACCATTTCTTATTCAGCATATCTCCGTCTTCCAACTAAAATGGCCAAAGAAGAAGTTAGAGGGATCATTGATGGAACAATCATTGAAATGGGTCTTCAAGATTGTGCAGATAGGTTGATTGGTAACTGGCACTTAAGAGGTATCAGTGGAGGGGAAAAGAAAAGACTTAGTATTGCACTTGAAATCCTTACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCAGCTTTCTTTGTTGTTCAAACTCTTAGAACTGTTGCTCGTGATGGAAGGACAGTAATCTCTTCTATCCACCAGCCAAGCAGTGAAGTATTTGCTCTCTTTGATGACCTTTTCTTACTGTCTGGTGGTGAAACAGTGTATTTTGGAGAAGCAAAGATGGCTGTAGAGTTCTTTGCTGAAGCAGGATTTCCATGTCCACGCAAAAGAAATCCTTCTGATCACTTCTTACGTTGTATCAATTCTGACTTTGACATTGTGACAGCCACTTTGAAGGGATCTCAAAGAATTCATGCTGTTGCAGATGCATCAGATCCTTTCATGAACTTGGCTACAGCAGAAATTAAAGCAATGCTAGTTGAGAGATACAGGCGTTCAGTGTATGCTAAAAGGGCCAAGGAAAAGATTCGAGAACTATCCACCATTGAAGGACTGGAAGCCGAAACACGAAGTGGAAGTCAAGCTAGTTGGTGGAAGCAACTTCTGACATTGACGAAGAGATCATTTGTCAACATGAGTAGAGATGTGGGTTACTACTGGTTAAGGATTATAATCTACATCATAGTATCTATATGTGTAGGAACTATTTACTTTGATATTGGTAATAGCTACACTTCAATCTTGGCCCGTGGAGCATGTGGTGCATTTATATCAGGATTCATGACATTTATGTCAATTGGAGGTTTTCCATCATTTATTGAAGAAATGAAGGTTTTCTATCGGGAAAGACTTAATGGATATTATGGAGTTGCAGCTTATATTTTAtccaattttctttcttctttcccgtTCTTGGTTGCTATTGCCGTTAGCACTGGCACAATTACTTATCACATGGTGAAATTTCGGCCTGGCTTTATTCACTTTGTGTTTTTCACTCTCAACATCTTTGGCTGCATAGCTGTGATAGAGAGCCTCATGATGGTCGTAGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATAATTGGAATCATGATGATGACCTCAGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCGGTTTGGCGTTACCCCATATCATATCTCAGTTATGGCGCCTGGGCAATACAGGGTGCTTACAAGAATGACTTGCTTGGACTTGAGTTTGATCCTCTAATACCAGGAGGGGAGAAATTGAAGGGCGATTATGTCATCACACACATGTTAGGCATCAAATTAGATCATTCCATGTGGTGGGACTTGGGGGCTCTATTTCTGATTCTCATATGTTACAGAATTCTTTTCTTCATTGTTCTCAAGTTCAAGGAGAGGGCTTCCCCATTGTTTCAGAGACTCCATGCCAAGAGAACACTTCAAGCTCTTGAAAAGAGACCTTCTTTCAGGAAAATGCCTTCTTTCCCTTCAAAGAGGCATCAGCCTCTGCACTCACTGTCTTCTCAAGAGGGCCTTGATTCTCCACTCCACTAG	1980	0.4157	LVWEDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRLDYGAVAYVTQEDVLLGTLTVRETISYSAYLRLPTKMAKEEVRGIIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHAVADASDPFMNLATAEIKAMLVERYRRSVYAKRAKEKIRELSTIEGLEAETRSGSQASWWKQLLTLTKRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGNSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILSNFLSSFPFLVAIAVSTGTITYHMVKFRPGFIHFVFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYLSYGAWAIQGAYKNDLLGLEFDPLIPGGEKLKGDYVITHMLGIKLDHSMWWDLGALFLILICYRILFFIVLKFKERASPLFQRLHAKRTLQALEKRPSFRKMPSFPSKRHQPLHSLSSQEGLDSPLH	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g4261	659	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	17	234	IPR027417	-
	Sto5g4261	659	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	1	245	IPR003439	GO:0005524
	Sto5g4261	659	Pfam	ABC-2 type transporter	337	546	IPR013525	GO:0016020\|GO:0140359
	Sto5g4261	659	MobiDBLite	consensus disorder prediction	642	659	-	-
	Sto5g4261	659	Pfam	ABC transporter	22	173	IPR003439	GO:0005524
	Sto5g4261	659	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 11	1	654	-	-
	Sto5g4261	659	Pfam	ABC-2 type transporter	202	257	IPR043926	GO:0140359
	Sto5g4261	659	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 13	1	654	-	-
	Sto5g4261	659	Gene3D	-	1	240	IPR027417	-
	Sto5g4261	659	CDD	ABCG_EPDR	1	227	-	-
	Sto5g4261	659	SMART	AAA_5	31	202	IPR003593	-
	Sto5g4261	659	MobiDBLite	consensus disorder prediction	632	659	-	-
	Sto5g4261	659	ProSitePatterns	ABC transporters family signature.	145	159	IPR017871	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g4261	Sto-Chr5	51309065	51315144	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g4261	17	214	Calmodulin-binding Proteins	AT2G36910	30.144	1.08e-11	66.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g4261	K05681		-	gmx:100807692	1161.36