Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4260 TTGAATCGGAAACTTCAATTTTCTGTGTCTGAGAAGTGGAAAAGGTTGGGGATCATCGCATCATCCGAGACATTGTTTGGAAGACTAGAAAATCCAAGAAAAGTGGTATCCTGTGTTATAATGGCGTCGGCAGATGCGGCTGTCCCGGTTCTGATTGAGATTGCGAAGAGTGTGATATGTGAATTGAAGCATCAAGCTCGTTACCTCTTCTGTTACAATAAAATTCTTGAAGATCTTCGAAATGAAAAGGGGAAGCTGATGTTAACAAAGGAAGGCGTGGTTGAACAGGCCAAACGCGCCCACAATAAAACTGAGAAGATTGGGAAAGAAGTTGAGAAGTGGTTCGAAGACGTGAAAATTTCCATAACGGATGTGGATAAGCTAGAAGAAGAAACAATAACAAACAAGACCACGTGTCTGTTCAGATGGTGCCCTAATTGCACTTTGCAATATCGTCTTGGAAAGAAAGCTACGAAGAAGATGAGGAAATTGATAGAACTTAATGCAAAAAGTGACTTCAACTGCTTCTCACAGCTTCTTATGCTCCCTGGCATGGAATATCATTCTTCTggagattttatttattttgagagtACAAATTTGGCTCGTGAGCAACTTTTGGAGGCACTGACAGATGATAAGAACTACCGAATAGGCTTGTATGGCATGGGTGGCTTCGGTAAAACAACTTTGGTAAAGGAAGTGGGCAAGGAAGTAGAGCAATCAAAGCTTTTTGACAAAGTTGTATTTATTGTTGTGTCCAGTCCTCCGGATGTAAGACAGATTCAGGATAACATTGCAAGCTCATTAGGTTTGAAATTTGAGGAAGAACATGAATCAGATAGAGCAAAAAGACTGTGGTTACGGCTGACTAATGGGGAGAGAATTCTTGTGATCCTGGATGATGTATGGGAAAAACTTGACTTTAAAGATATAGGAATTCCAACTGAGGACAATTTCAGTGGTTGCAAAGTTCTCCTAACTACACGCAGTGTACAAGTATGTGCTTCAACAAAATGTCAAAGGATGATTCTGCTTTCTCTTTTATCGGATGTGGATGCATGGATTCTATTCCAAAAGCATGCAGGCATAACCAATGACTCATCCAACTCTTTGAAAGATGTAGCAAAAGAAATTGCGAAGCAATGCAAAAGACTACCAGTTGCAATTGTTACTGTGGCAAGCTCCTTGAAGGACCGGTCCCTAGAAGATTGGAAGATGGCTTTGACAACGTTGAAAAATTCTAAACCAGTTGATGATATTGATGAAGATCTGATAAGAATTTATGAGTGTTTGAAACTAAGCTTTGATTATCTTAGGAGTGACAAAGTTAAAAATCTCTTCTTGTTATGTGCTTTATTTGAAAAAGATTATGAAATTCCTATGGAAGATTTAACTATACTTGGTAAAGGGCTCGGATTACTTGGGGATGTTGACTCCTATGAGACAACAAGGAGTCTTGTGCGTGCTGcgaaaaataaactaatagaTTCTTGTTTGTTGCTACAAGGCAGGGAAGGCGGATATGTTAAAATGCATGACTTGGTACATGACATGGTCCACTGGTTAGCAAACAATGAGATTGAGGTAATTATGGGCCCCAAAAGGAATACGAAGGCATTAGCGGAAAAGTTTGGAAAGGCAAGTACAATACGGAATGCAGGATCTGAGAGTTTTGGTTCTAAGGGTTCAGCACCTTTGGAAATCATCAATCCTACAATTGCCAAAGTCAATTCAATTGTTAACAAATCTTCGAGTACTGCGCCTAAGAAGTTGGAAATTAGGAGACATCTCTATTTTGGGGAACTTAAAAGGCTTGAGAGTTTTGAATTGATAAATTGTTGGATTGATGAGTTGCCAAATGGAATCGCGGAAATGGAGGAATTGAAACTGTTgaatttgagaaattgtaaaattaaaaGGAATCCTTATGAGGTGATAGGAAGATGTTCACTTTTAGAAGAACTTTATTTCATCCTGAATAAGGGTTTAGAAGATCCACTTGACTTTCAAAATGCTGCTAAACTATTCAAAAGAAACAGTTCTCCTGTGTTACGAAGGTACCATTTAGAAATAGGGGGAGGTTTTGATTTATACTCAGTGTATGATTCAATATCAAGAGGTATAGCTATTGAAAACTTTGATGCTTCCTCTTCAAATACAACAATTAAAGATTTAGTACAAAGAGCAGAGATTTTGCATTTAGAAAAGCTTCAGGGAGGTTGTAGAACTGTTATACCAGATATAGTCCAAGCAGAAGGGGGATATATGAATGATTTGATTCTGCTGCTACTTAATTCTTGTTCTACAATAGAACGTCTTGTTGATACCTCCAATACCAATTTTTTTCTTGGGGTTGAAACTATCTTGCCTAATTTGGCTAAGCTAATGCTAAATAACATGGATAATCTGAAAGAATTGTGCCAGGGTCCATCTCCTTTTGGCTTTTTAGAGAAACTAGAAGAGCTATATATAAGGAACTGCAAACAACTGCAGAGGAAATTATTTTCTGGAAGCATGAACTTTTCAAAACTTGCAGTAGTGAAAGTGCAATATTGTCCGATGTTGACATCTCTCTTCTCTCCCTCTACAGCCAGGACTCTGATTATGCTAAAATATCTGGAGATACATGAATGCAATGAACTGAAATGTATTATTGCAGATCAGATAGAGGAAGGAGAGGAAATAGTTCAGGATAATCATGATCAAAGGACTCTTGTCCCAATGTTCCCTAATCTAGAAACTCTTCACATCGATGGATGCAATTCCATAGAATTCATATTTCCCCTCTCTTTTGCTCCAAATCTTCCATTGTTGAAAACTATCAAGTTAAGCAGGTCTTGTGAGCTCAAATACATATTTGGTATATACCAACATGAAGATCCACTTTTGCTTCGCGATGAGAAGGATAACATGCTCCCCTTATTGAACAAAATAACTCTCATTGAACTACCAAGTTTTGTTGGCATTTATCCTGGATCTTGTGATGAGTTGTCTTTGCAGAAACTTTTGCCAAAAAATGGTCCCATATTGAGTGCAACAACAAGCAAACCAGACCCTCACAACTCAGTGGGTTTATACAGGTCAAACTTGGAGTCGCTTTTCCCTGTTGATGTATCTCAATATCTTTCAAAGCAAATGCTGCACTTTTGCTACGTTGAGAAGATTAAGCTAACAAATTGTCCGAAGTTAATATCGCTGTTCACTCTGTCCAGTGTTCCTACAATGTTGCTGaaagaattaataattaaggaGTGTCATGGATTGAAGCATTTAATAATTGATGATGGAGATGAGCATGATCAATTGAACAATGGCTCCGTCTTCCCAAAATTAACAACATTGACTGTATGGAAATGCAGACTACTGGAATCAGTATTCCCAGCCACTTTCTCTGAGGGCCTTAAACAATTGAAATATATGGAAATTGCAGAAGCTCCTGAGCTGAAGTATGTGTTTACTCACTATCATCAAAAAGATCATTCATCTCACCAGAAGCAGAATAAGATTTACATAAATCTACCTGCATTGGAGCATCTCTGCCTCAGAAATTTACCAAATATTTTAAGCTTTTGCTCCAGCAATTATTATCCAACATGGCCATTTTTGCAGAAGTTCATTGTGGATGAATGCCCCAAGTTGAGTTTCATGTCAATTAGTGAAGTGGATCGGAAAACAACAGAGGAATCAACAATGATGACAACTCATGGCCGCCAATCAAGAGATGAAGATAGAACACTAGAAGAAATGCAAACCTTGAAAACAATTTATGTAAATAAAAGCAAAATAGAAGGCATCTTTCAAATAAAAAGACTTTCTATCAATAGACTGCAGGTGATCTCAAGTTTGCAAAGTATGACGTTGCACCATCTACCTGAGCTGAGATACATATGTATAAGTCAGAAACAATTGATGAGCCTTCAAAGTCTTGTATTTTTAGATGTCTCTCATTGCAGAAGATTGAAAGTTATCTTCACAGTTTCTGTGTTGAAAGACTTACCACAGCTGAAGTACTTATCCATAAGAAACTGTGAACAACTGGAGCACATTATTGAAGACGATGATGACCAGACATCATCAAATCATCATTCTCCACAAGTGCTCTTACCAAATTTGACTACAATTGACGTCCAGCGGTGCAGAAATTTACAATGTCTTTTCTCTATCTCCACATTCCTTGACCTCCCAAGACTAGAGTACTTGAGCATAGTGGATAGCCCTCGGCTACATGAAGTCTTTGGATGCAAAAGAAGTGAGACACTAGATGGGAAGGATGGTTTCATGCTCCCAAGTCTAAATTTCCTAAGACTTGTGCAACTGCCAAGCCTCATCAACATCTGCCATTGTTTCCAGTTTCAGACTAAAAGAGATTGCCAAGTGTTTGTGCGTGGTTGTCCCAAATTCCCTCTGTCTTCAACATCTAATCCCGGGGATGCAGAATCTAAGCAATCGCAACTCCTTCATTCCACTGAGGTTCCGACTTTGCTTTCTGCCTTCCCACCCTCTTCTCAATCTCTCTCTTCCATTTCTGAGGCCTTTGGTGGTGCTGAACAGCCAATTTCAGTTTGTACCACAAGAGATGATCACCCCACAACTAAACAAGCATCAATTATGTCTTCAACAGAAGAATTGGTTgatttccacaatctatttaaGATTGATCCAAGACGTGCTTCCTTGCTAGATGAGGCATTTGCCAAATACCCACATTTATGGGAGTGGCAAAAGGGATTGCGCCTCAAATTTTGCAAATGGGGCTATGAGTCTTTGGCTGACATGCTTATGTTTCTAAAGTCAGAAACACCTATGGCTATGGATGACTTAAGGAAGCAAGAATTTGAAAGATTATATTCAGAGTTGGATTCTTTTGGGTTTGACAAGGGATGGTTGGAATCCTTATACAAGCGAGTGATGGAAGTGCAAGTTGACGAGGAAAAGTTAAGGGAACTAGCTGAGTTGGAGTTACAAGAGGACTTCTTACTAGGAGAACTGAACAATGCAAGGATCAAAATAGGAAGAATTAGAGATGATGTATCTAAATATGACACTATATTTGACTTTTGA 5064 0.3807 LNRKLQFSVSEKWKRLGIIASSETLFGRLENPRKVVSCVIMASADAAVPVLIEIAKSVICELKHQARYLFCYNKILEDLRNEKGKLMLTKEGVVEQAKRAHNKTEKIGKEVEKWFEDVKISITDVDKLEEETITNKTTCLFRWCPNCTLQYRLGKKATKKMRKLIELNAKSDFNCFSQLLMLPGMEYHSSGDFIYFESTNLAREQLLEALTDDKNYRIGLYGMGGFGKTTLVKEVGKEVEQSKLFDKVVFIVVSSPPDVRQIQDNIASSLGLKFEEEHESDRAKRLWLRLTNGERILVILDDVWEKLDFKDIGIPTEDNFSGCKVLLTTRSVQVCASTKCQRMILLSLLSDVDAWILFQKHAGITNDSSNSLKDVAKEIAKQCKRLPVAIVTVASSLKDRSLEDWKMALTTLKNSKPVDDIDEDLIRIYECLKLSFDYLRSDKVKNLFLLCALFEKDYEIPMEDLTILGKGLGLLGDVDSYETTRSLVRAAKNKLIDSCLLLQGREGGYVKMHDLVHDMVHWLANNEIEVIMGPKRNTKALAEKFGKASTIRNAGSESFGSKGSAPLEIINPTIAKVNSIVNKSSSTAPKKLEIRRHLYFGELKRLESFELINCWIDELPNGIAEMEELKLLNLRNCKIKRNPYEVIGRCSLLEELYFILNKGLEDPLDFQNAAKLFKRNSSPVLRRYHLEIGGGFDLYSVYDSISRGIAIENFDASSSNTTIKDLVQRAEILHLEKLQGGCRTVIPDIVQAEGGYMNDLILLLLNSCSTIERLVDTSNTNFFLGVETILPNLAKLMLNNMDNLKELCQGPSPFGFLEKLEELYIRNCKQLQRKLFSGSMNFSKLAVVKVQYCPMLTSLFSPSTARTLIMLKYLEIHECNELKCIIADQIEEGEEIVQDNHDQRTLVPMFPNLETLHIDGCNSIEFIFPLSFAPNLPLLKTIKLSRSCELKYIFGIYQHEDPLLLRDEKDNMLPLLNKITLIELPSFVGIYPGSCDELSLQKLLPKNGPILSATTSKPDPHNSVGLYRSNLESLFPVDVSQYLSKQMLHFCYVEKIKLTNCPKLISLFTLSSVPTMLLKELIIKECHGLKHLIIDDGDEHDQLNNGSVFPKLTTLTVWKCRLLESVFPATFSEGLKQLKYMEIAEAPELKYVFTHYHQKDHSSHQKQNKIYINLPALEHLCLRNLPNILSFCSSNYYPTWPFLQKFIVDECPKLSFMSISEVDRKTTEESTMMTTHGRQSRDEDRTLEEMQTLKTIYVNKSKIEGIFQIKRLSINRLQVISSLQSMTLHHLPELRYICISQKQLMSLQSLVFLDVSHCRRLKVIFTVSVLKDLPQLKYLSIRNCEQLEHIIEDDDDQTSSNHHSPQVLLPNLTTIDVQRCRNLQCLFSISTFLDLPRLEYLSIVDSPRLHEVFGCKRSETLDGKDGFMLPSLNFLRLVQLPSLINICHCFQFQTKRDCQVFVRGCPKFPLSSTSNPGDAESKQSQLLHSTEVPTLLSAFPPSSQSLSSISEAFGGAEQPISVCTTRDDHPTTKQASIMSSTEELVDFHNLFKIDPRRASLLDEAFAKYPHLWEWQKGLRLKFCKWGYESLADMLMFLKSETPMAMDDLRKQEFERLYSELDSFGFDKGWLESLYKRVMEVQVDEEKLRELAELELQEDFLLGELNNARIKIGRIRDDVSKYDTIFDF 1687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4260 1687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 451 IPR027417 -
Sto5g4260 1687 Gene3D Ribonuclease Inhibitor 1240 1468 IPR032675 -
Sto5g4260 1687 Coils Coil 1650 1670 - -
Sto5g4260 1687 Gene3D Ribonuclease Inhibitor 699 959 IPR032675 -
Sto5g4260 1687 SUPERFAMILY L domain-like 1028 1453 - -
Sto5g4260 1687 Gene3D - 348 434 IPR042197 -
Sto5g4260 1687 Gene3D Ribonuclease Inhibitor 580 688 IPR032675 -
Sto5g4260 1687 Gene3D - 193 345 IPR027417 -
Sto5g4260 1687 SUPERFAMILY L domain-like 591 954 - -
Sto5g4260 1687 PRINTS Disease resistance protein signature 383 397 - -
Sto5g4260 1687 PRINTS Disease resistance protein signature 624 640 - -
Sto5g4260 1687 PRINTS Disease resistance protein signature 217 232 - -
Sto5g4260 1687 PRINTS Disease resistance protein signature 290 304 - -
Sto5g4260 1687 Pfam NB-ARC domain 204 437 IPR002182 GO:0043531
Sto5g4260 1687 PANTHER - 50 947 - -
Sto5g4260 1687 Gene3D - 435 522 IPR036388 -
Sto5g4260 1687 Gene3D Ribonuclease Inhibitor 1021 1235 IPR032675 -
Sto5g4260 1687 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1244 1359 - -
Sto5g4260 1687 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 50 947 - -
Sto5g4260 1687 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 913 1216 - -
Sto5g4260 1687 PANTHER - 1244 1359 - -
Sto5g4260 1687 PANTHER - 913 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4260 Sto-Chr5 51293563 51302037 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4260 218 527 WRKY Transcription Factor Family AT5G45050 26.250 8.04e-08 55.5