Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4255 ATGATGTCACTTTCACCTAGCTTAGGATCTCCATACACATGGCTTAGAGAGCTTAAATCCGAGGAAAGGGGTTTGTACCTCATCCATTTGTTGCTCACTTGTGCTAATCATGTAGCTGCTGGTAGTCTTGAAAATACAAATATCGCCCTCGAACAGATTTCCCATCTGGCTTCGCCGGATGGCGATACTATGCAGCGAATTGCTGCTTATTTTACTGAAGCACTTGCTGATAGGATACTTAAAACATGGCCTGGTCTTCACAAAGCTCTTAATTCCACAAGGATAGTCATGGTGTCTGAGGAAATTCTGGTCCGAAAGCTGTTTTTCGAGCTGTTTCCATTTTTGAAGGCAGCTTTTGTTCTTACGAACCAGGCTATAGTTGAAGCAATGGAAGGGGAGAAGATGGTTCATATAATTGATCTCAATGCTACTGAACCTGCACAATGGATTGCACTCTTGCAAGTTTTGAGCGCCCGGCCTGAAGGTCCTCCTCACTTGAGGATTACCGGCATTCACCAACAGAAAGAGATTCTAGATCAGATGGCTTATAGACTGACTGAAGAAGCAGAGAAGTTGGATATACCATTCCAGTTCAATCTTGTGGTCAGCAAATTAGAGAATCTTGATTTTGACAAGCTTCGTGTGAAAACCGGGGAAGCACTGGCAATCAGTTCAATACTCCAATTGCATTCCCTTTTGACATTGGATGATGAAGCTTTACGGAGAAGATCTCCTCTCCTGTCGAAAGTCTCGAACGGGACTCATCTTCAAAGAGTCCTGCCAATGAACCAAAGCACATTGGGTGATTTGCTTGAGAAAGACATGATCAACAATGGCTACAGCCCGAGTCCTGACTCGGCCACATCCTCTCTGGCATCTTCAACTGCTTCGAGGAGTATGGAGAGCTTTCTTAATGCCTTGTGGAGTTTATCACCGAAAGTCATGGTTGTAACAGAACAGGACTCCAATCACAATGGTTCCACTCTGATGGAGAGGCTACTAGAAGCTCTGTATTCTTATGCAGCATTGTTTGATTGCTTGGAATCCACAGTCTCACGAACTTCATTGGAGAGACTGAAGGTGGAGAAGATGCTATTCGGCGAGGAAATTAAGAACATTATTGCGTGCGAAGGAGCCGAAAGGAAGGAAAGGCACGAAAAGCTTGATAAGTGGCTCCAGAGGCTTGATTTATCTGGGTTTGGGAATGTGCACTTGAGCTATTATGGGATGTTTCAGGCAAGGAGGTTACTTCAGAGCTATGGTTGTGAGGGGTACAAGATGAGGGAAGAAAACGGTTGTGTCGTGATTTGCTGGCAGGACAGGTCACTTTTTTCAGTATCAGCTTGGAGATCTAGGAACTTTTGTCCATATGGTATTGACTATTCTTCAAGATCTGTTTAG 1401 0.4425 MMSLSPSLGSPYTWLRELKSEERGLYLIHLLLTCANHVAAGSLENTNIALEQISHLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRIVMVSEEILVRKLFFELFPFLKAAFVLTNQAIVEAMEGEKMVHIIDLNATEPAQWIALLQVLSARPEGPPHLRITGIHQQKEILDQMAYRLTEEAEKLDIPFQFNLVVSKLENLDFDKLRVKTGEALAISSILQLHSLLTLDDEALRRRSPLLSKVSNGTHLQRVLPMNQSTLGDLLEKDMINNGYSPSPDSATSSLASSTASRSMESFLNALWSLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIIACEGAERKERHEKLDKWLQRLDLSGFGNVHLSYYGMFQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSVSAWRSRNFCPYGIDYSSRSV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4255 466 PANTHER SCARECROW-LIKE PROTEIN 3 1 451 IPR030008 GO:0003700|GO:0005634|GO:0009739
Sto5g4255 466 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 451 IPR005202 -
Sto5g4255 466 Pfam GRAS domain family 27 450 IPR005202 -
Sto5g4255 466 ProSiteProfiles GRAS family profile. 18 450 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4255 Sto-Chr5 51251157 51252703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4255 2 452 GRAS Transcription Factor Family AT1G50420 69.499 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto5g4255 GRAS 9.5e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4255 - - tcc:18589932 754.207