Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4249 ATGGACATTGCACTCTCTGTTGTAACTAATATTGTGAGTAAGTTAGTAGATACAGCAATACGCCAAGCTCGCTATTCTTTCCAGTTCAACAAGTATGTTAATgatcttgaaaaagaaaaagtgaacttgcaattaaaaatagaaagcaCTATTGGCCGTGCTCAAGAAGCTAAGAAGAAAACTGAAAAGATTGTTAGTGTTGTTGATGATTGGTTGAGTAAAGCAGACTCTCTCATGGCACAAGTGTTGGAAATGGAAGAAAAggcaaagaaaagaaacaaggcAACTTGTCTTAAGTGTTGCCCCAACTGGGTTAGCCGTTATGGTTTAGCCAAAAAGCTTGAAGAGAAAATCAATGAAGTTATAGAGCACAACAAAAAAGACGATTTTCCTGAGTTTTCTCGACTTGCTACACTCATAGGCATGAACTATTTTTCTTCGGAAGCTTTTGTACACTTCAATAGTAGAAAGGGGGCTTTTGATGGACTTTTGGAGGCACTAAAAGATGATAAGGTTCACATGATTGGATTATGGGGAATGGGTGGGTGTGGTAAGACAACCTTGGTAAAAGAAGTGAGTAAAGAAGCTGAGAAATTTTTTGACAAAGTTGTCTTTGTTACTGTGTCTAATACCAATCATGTTCGAAATATTCAAGGTAACATTGCAAGCCAACTAggtaaattagaattaaaagagGAAGAGGAACCAGAGAGAGCTAGACGCTTGTTCATGAGATTAAATGGTGGAGAAAGGCTTCTCATAATTTTGGATGATGTTTGGAGGAAGCTTGATTTTGAGGCTATAGGAATTCCTATaggtgaaaataaaaatggttgCACTGTTCTTATAACTACACGATATCGTCATGTTTGTACTTCGATGAATTGTCAAAGTATGATTGCCCTAGATCTCTTAAATATGGAAGAAGCATTGACTCTCTTTCAAAAGCATGCAAGATTGTTTGATGATAACTCTGAAACCTTGAAGTTGAAGGGTTTGGCAGAGGAAATTACAAAAGAATGTGGTGGTTTACCTGTTGCAATTGCTGCTGTGGCTAGCACTTTGAAGGGAAAAACTCAAGTTGAGTGGGAAGAAGCATTGGAGACCTTAAGAGATTCTAGTCCAATGGATATTGAAGAAGGTCTAAAAAATCCGTATACATGTCTTCAACTAAGCTTTGATAATCTAAAGAATGAAGTAGCCAAATCACTCTTTTTGTTGTGTTCTGTGTTTCCAGAAGATTATGAAATTGTCATTGATGATTTGGCTATATTTGGTATAGCGCTAGGAGTGGTTGGAGAAACTCACACATTTAAAAGGGCAAGAAACCAAGTGAGTATAGCCATAAATAAGCTTGTAGATTCTTGTTTGTTGTTGGGAGCTACGGAAAATGGAGTCATTAGCATGCATGACTTGGTTCGTGATGTGGCCTTGTGGATAGcaaaaaatgagaataagataATTATGGGACCAGAAAGGAGTCAAAAGGTGTTAAATGTCGATATGATTTTAAAGGACAATACTATAAGATATTTGTGGCTCGAGGAAGTGGATAAATTTCCTCATAGGTTGGATTGTCCAAACCTTGAATTTCTTCATATGTCCATAAATTCAGAGAGTCTTGTGGATGTAACAAATGAGCTTTTGGATGGAATTAAGAAGCTTAGagttttatttcttaaaaactcTTTTCGAGGAGACCAGGCCCTACAATTGCCAAAGTCAATCCATTCGATAAATAATCTACGTTGCCTATTATTGTTTGGATGGAGATTAGGTGACATCTCTTTGTTAGGAAGCTTAGAAAGACTTGTAATTTTGAAGTTAAGCTTTTGTTCCTTTGATGAATTACCAAATAGTATGCCAGAACAAAAGAATTTGAGACTTTTACAAGTAGCATACTGTACAGTTAAGAGGAATCCTTATGAAGTGATTGGAAGATGTTCACAACTGGAGGAATTGTATTTTTACCACACTAATGGAGAAGATTTGGAGTATAAAGATGAAAATGTTGTTGAATTCTTTGATAAAATTAGTGCTACACTACCATTGGAAAGGTACAATTTAAATATAGGAGAGTGTTATGGAAGCCATCTTCCCCAATTAGATAGTTCAACTATAGCAAGACTTCTATCTGTGGACTATTTTGAGAGTTGCATCTCAAATGAAACAATAAGGGATCTAATGAAAAGAGCAAATGCTCTTTCTTTGGCAAGAATCAATAGTTATAAAAGTATCGTCCCTGACATTGTTCAAAGAATAGGAGGGGATTTGAATGAATTGACTATACTTGATCTCTATGATTCAGATGGGATAGAGTGTGTGATAGATATTCCGAATCATTTGGCGTTTGGTCTCGTTAGAATCATCTCCAATTTGACTCACTTAACCTTATCAGGAATGGAGCATTTGAAAACTCTGTACAATGGTCATCCTCCTCAGGGACTTTTTGCAAATTTGGAGATTCTACATATAGCCAAATGCAATTCACTTGAGCATCTAATAGCAGATGAAGTGGAGGAGATAGTTCTTGACTATAGTCTGTCATTCCCAAACTTACAAACACTTTCTATTCGTGAATGCAATCAGCTAGAATACTTATTCCCGGTCTCCTTTACTCAAAGCTTTCCACAGTTGAACCATTTAACTATAGAAGGAGCTGCTAAATTGAAGACTATATTTGGCCAATCCAATTATAAAGATCAGAATCCAAACGAATTTCAGATCATTGAATTTTCTGCTTTAAAAGAGATTATTCTCTATGACTTGCCAAATGTCAATAGCATTTGTTCAGAAAATTATTGTCCAAGATGGCCATCTTTGGAAAGCTTGCACTTGAGGAAATGTCCACAGCTAACCTCCATGTCTGTAAGCAATCACAACATCCCCTGCTCTGGATTGACACAAGATCACACAGAAACAAAGgATGTAATGAGGGCAAAAGAGATAAATCTGGAGAAGTTGAAAACAGTTATGCTGAGAAACTTTAAGGTTGATGTTCTTTTTTATCTAGAAGGACAGCAAATTAACTCAAGCTTGCAAAAGCTTCTATTGGAAGATGTACTTGAGTTAAGGCATATATGGGTGGGTCCCAAAAATTTGTTACAACTTCAAAACCTTGGTAGTTTGGATATTAGGAAATGTGAAATTTTGAAGGTTGTCTTCCCCACAACCATTTCGAGAAGCTTTCCACAGTTACGGGAACTGATCATCATGGATTGTAAGGAACTGGAGGAAATCATTGAAGAAGATCAAAATGTGTCAAATCCTCAACTTCTATTCCCAAATCTAACCATAATCATCATCAGACATTGCCATAAGTTGAAATGTGTATTTCCTGTGTCCACATCTCATGTGCTTCCAAAATTAAAGGTGCTGTGGATAGAAGAAGCATCCCAACTAGAGCAAGTATttggaaatgaagaagaaaaaatggaGGGTGTGATGATTCCAAATTTGAAATATGTATTACTTATGAAGCTGCCAAAACTGAAAATGGGGCCACAATGGATTGGCTTGCAAACTGCGACATACTGTTTAGTGCAAGATTGCCAACATCTCAATTTCACTTCCTCTATTGCTTCTCTTGAGGAGTTTCACAAACTATGCAAAATTGTGATAGatCTAGAAATGGACTATGATGTGTGGGACTTGTATTTGGAGTTGGAAGAGATtattaaatccaaacaagattttAGCTCAGAAATCAATAAACAATTTGATAACGTGGAAATTGAAGATGAAGCAGTATTATTTGAGGATTTCTTTTCACAAATGGaaaccaatcaaaataatagTGGCACCCAGTCAGAGAAGGAGTTGACACCCATTGCTTCACCAAAATTGAATGAGAGTCAAAACAAAACAACAAAGAAGACTGTTGGAGAAGTGCCTGCCTTAGAGAAACCTATAGCTATGGCAACTTCATCAACAAATCCAGAATTTGAACTTGATAATGATGAAGTTCTTCTAGGAACTAAAAGGATTGAAAGAAATTTTAAAGAAGGTTTTTCATCAGAGAATGCTAAAACAGTTATTTCATTGATTCATTCAGAACCAGCACAATCACTCCCAACCCCATCACTTACTTCTTTGCCTGGAGTATTTCCACTGagtcaaattaatatcaagcaGACTGAGACAGACATTGATAAAGACACTGAGCCCAATCCTTTAATAAATCATCAAGACTTTGAAAATGATGATGGTGAAATACAAATATCTTCAGTTGTTACCATAAAAAATGACTTTGTGGAAAAGGTCCTTTCAGACTTGGAGGTCTCCATGAAGTTTCCTCTTAAGGACATAGCCATCTCAGAGGCCAATACTCTTCACATTTTGACTCTTCTCAACTTCTTGTCTCGCCTTTCCATCGAAGATGGAGCATTCCCCCAAGGACTTAGAGCTATAGTAAAGTCTTTGCACCAAGATTTGCCAAGCATTTTGTATTCTTTCAAGCCAGCCTTAGCTGTGATCAAAAAATTCCATGAAGCTCAAGAGAAGGAAGCTAGGCTGATGGCACTGATCTTTATGAGGGAGAAAGAAATAGAGGATTGTGAGGCTAAGCTATCATCTCTTCAAGAGCAAAAGAGGACATGTGATGCAGAAGCAACCGAATTCAAGAAAGAGTATGAGAGTGTGATGAAAGAAATTGATGAAATGGGGGAAGATCAAAGAAAAACTTGGCAACAGTTGTTTGATGTTGATTATAAATGGTCGGTTCTGTATAGTCAATTTCAGCAGAAAGACATTGATGTGCATACCCGTCAAATAATACATTCTACATTTGAAAATGTAATTGAATCCAATGAAGATTCTAGTAGAGAAACCACCAAACAAATCAACAACAAAGAAACTGAAGTTCAAGCAGCATCAGAGAGTGATCACCTTTTAGAGCAAAAGTCGGCACATGTTGCTGCACCAAACTTGATAGAGAGTGATCAAGAGGTAGAAGATGAAGACCAAAGTGTTCAAGAGGGAAATATATTAGAGGAAACGAGTATTGTTAAAGGAAATATTGAAGAAGGTTCTACTTCTACATCAAAGAATACTGAAGCATTTCTTCTTAGTCAAATCAATATAAATCAATCAGTTCCTATTGCTGCTACCACCAAAGATGAACTTGTGACAAAGAACATTTCAGACATGGAAGTTTCTCTGAAGATGCCTCTTAAGGATATAGCAACCTCAAAGGCCAATAGCCTCCGCCTTCTAACCGCTCTCAACTTCTTGTCTTGCCTTTCCTCGGATGATGGAGCTCTACCTCATGAACTTAAAGCTATAATAGACTCTTTGCACCAAGATTTGCCAAGTATTCTGTGTTATTTTAAGTCAGCCTGTGCTAAAATCAACAAATTTTCCAAGTTTATGGATGAAGCTCAAGAGAAGGAAGTTAAGTTAAAGGAACATATCTCTAGGCTGGAGAACGAAATAAAAGAGTGTGACGCAAAGTTATCATcgtttgaaaagaaaaagaagaaatatgtTGCAGAAACCATAGAGTTGAAGAAAGAGTTTGAGAGTGCTGGGTTGATTTTTATTGCAATGGAGATTGCTACTGCTGCTGCAGCTGATATTGTGACGTTAAATGAGGAAGAAGCATGGGCTCTATTTCAAAAGCATGTTGAGTTCTCTGATGATAGCTTAAAAAGTGTAGCAAAGGAAATTACCAAAGAATGTTGTGGTTTGCCTGTTGCAATTGCTGCTGTTGCTAGCACTTTGAATGGAAAAGAGCAATTTGAGTGGGAGGAAGCATTAAAAACATTGAAAGATTCAAATCTACTGGAAATTGAAGAAGGTCTACAAAGTCCTTATGCTTGTCTCGAATTAAGCTACAAGCAATTGAAGAATGAAGTAGCTAGATCACTCTTCCTTTTGTGTTctgtatttccagaagattaTGAAATTTCATCAGACCTTTTAACGATAATTGGAATAGGCCTAGGGCTGGTTGAGGAATTTCAGTCTTATACAAGGGCAAGGAACATTGTCCGCAAAGCGAAAAACAAGTTTACGGATTCTTGTTTGCTGCTAAAAGTTGACGAAGAAGTGAATGAAGTCAAAATGCATGACTTGGTTCGTGATGCAGCGTTGTGGATAGCAAATAAAGAAGGCAAGTTGATCATGGGACCAGAAAAGAGTCATAAGGTGTTAAGTGAGGATATGATTATGAAGGACAGTTGGAGGAGGGAGAAGAATGGGAGAAGCAAGATCAAAGTTTTGCTAAATGTGTTGATAAAGCGAGCAGCACTACACTGGAATTAG 6264 0.3576 MDIALSVVTNIVSKLVDTAIRQARYSFQFNKYVNDLEKEKVNLQLKIESTIGRAQEAKKKTEKIVSVVDDWLSKADSLMAQVLEMEEKAKKRNKATCLKCCPNWVSRYGLAKKLEEKINEVIEHNKKDDFPEFSRLATLIGMNYFSSEAFVHFNSRKGAFDGLLEALKDDKVHMIGLWGMGGCGKTTLVKEVSKEAEKFFDKVVFVTVSNTNHVRNIQGNIASQLGKLELKEEEEPERARRLFMRLNGGERLLIILDDVWRKLDFEAIGIPIGENKNGCTVLITTRYRHVCTSMNCQSMIALDLLNMEEALTLFQKHARLFDDNSETLKLKGLAEEITKECGGLPVAIAAVASTLKGKTQVEWEEALETLRDSSPMDIEEGLKNPYTCLQLSFDNLKNEVAKSLFLLCSVFPEDYEIVIDDLAIFGIALGVVGETHTFKRARNQVSIAINKLVDSCLLLGATENGVISMHDLVRDVALWIAKNENKIIMGPERSQKVLNVDMILKDNTIRYLWLEEVDKFPHRLDCPNLEFLHMSINSESLVDVTNELLDGIKKLRVLFLKNSFRGDQALQLPKSIHSINNLRCLLLFGWRLGDISLLGSLERLVILKLSFCSFDELPNSMPEQKNLRLLQVAYCTVKRNPYEVIGRCSQLEELYFYHTNGEDLEYKDENVVEFFDKISATLPLERYNLNIGECYGSHLPQLDSSTIARLLSVDYFESCISNETIRDLMKRANALSLARINSYKSIVPDIVQRIGGDLNELTILDLYDSDGIECVIDIPNHLAFGLVRIISNLTHLTLSGMEHLKTLYNGHPPQGLFANLEILHIAKCNSLEHLIADEVEEIVLDYSLSFPNLQTLSIRECNQLEYLFPVSFTQSFPQLNHLTIEGAAKLKTIFGQSNYKDQNPNEFQIIEFSALKEIILYDLPNVNSICSENYCPRWPSLESLHLRKCPQLTSMSVSNHNIPCSGLTQDHTETKDVMRAKEINLEKLKTVMLRNFKVDVLFYLEGQQINSSLQKLLLEDVLELRHIWVGPKNLLQLQNLGSLDIRKCEILKVVFPTTISRSFPQLRELIIMDCKELEEIIEEDQNVSNPQLLFPNLTIIIIRHCHKLKCVFPVSTSHVLPKLKVLWIEEASQLEQVFGNEEEKMEGVMIPNLKYVLLMKLPKLKMGPQWIGLQTATYCLVQDCQHLNFTSSIASLEEFHKLCKIVIDLEMDYDVWDLYLELEEIIKSKQDFSSEINKQFDNVEIEDEAVLFEDFFSQMETNQNNSGTQSEKELTPIASPKLNESQNKTTKKTVGEVPALEKPIAMATSSTNPEFELDNDEVLLGTKRIERNFKEGFSSENAKTVISLIHSEPAQSLPTPSLTSLPGVFPLSQINIKQTETDIDKDTEPNPLINHQDFENDDGEIQISSVVTIKNDFVEKVLSDLEVSMKFPLKDIAISEANTLHILTLLNFLSRLSIEDGAFPQGLRAIVKSLHQDLPSILYSFKPALAVIKKFHEAQEKEARLMALIFMREKEIEDCEAKLSSLQEQKRTCDAEATEFKKEYESVMKEIDEMGEDQRKTWQQLFDVDYKWSVLYSQFQQKDIDVHTRQIIHSTFENVIESNEDSSRETTKQINNKETEVQAASESDHLLEQKSAHVAAPNLIESDQEVEDEDQSVQEGNILEETSIVKGNIEEGSTSTSKNTEAFLLSQININQSVPIAATTKDELVTKNISDMEVSLKMPLKDIATSKANSLRLLTALNFLSCLSSDDGALPHELKAIIDSLHQDLPSILCYFKSACAKINKFSKFMDEAQEKEVKLKEHISRLENEIKECDAKLSSFEKKKKKYVAETIELKKEFESAGLIFIAMEIATAAAADIVTLNEEEAWALFQKHVEFSDDSLKSVAKEITKECCGLPVAIAAVASTLNGKEQFEWEEALKTLKDSNLLEIEEGLQSPYACLELSYKQLKNEVARSLFLLCSVFPEDYEISSDLLTIIGIGLGLVEEFQSYTRARNIVRKAKNKFTDSCLLLKVDEEVNEVKMHDLVRDAALWIANKEGKLIMGPEKSHKVLSEDMIMKDSWRREKNGRSKIKVLLNVLIKRAALHWN 2087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4249 2087 SUPERFAMILY RNI-like 984 1135 - -
Sto5g4249 2087 PANTHER - 1849 2065 - -
Sto5g4249 2087 PANTHER - 7 1089 - -
Sto5g4249 2087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 408 IPR027417 -
Sto5g4249 2087 Coils Coil 33 53 - -
Sto5g4249 2087 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Sto5g4249 2087 Pfam NB-ARC domain 1858 1946 IPR002182 GO:0043531
Sto5g4249 2087 Coils Coil 68 88 - -
Sto5g4249 2087 Gene3D Ribonuclease Inhibitor 689 908 IPR032675 -
Sto5g4249 2087 Gene3D Ribonuclease Inhibitor 982 1146 IPR032675 -
Sto5g4249 2087 Gene3D - 304 389 IPR042197 -
Sto5g4249 2087 Gene3D - 1861 1940 IPR042197 -
Sto5g4249 2087 Gene3D Ribonuclease Inhibitor 485 678 IPR032675 -
Sto5g4249 2087 Coils Coil 1509 1557 - -
Sto5g4249 2087 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 7 1089 - -
Sto5g4249 2087 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1849 2065 - -
Sto5g4249 2087 SUPERFAMILY L domain-like 469 955 - -
Sto5g4249 2087 SMART AAA_5 171 324 IPR003593 -
Sto5g4249 2087 Gene3D - 1941 2031 IPR036388 -
Sto5g4249 2087 Gene3D - 390 478 IPR036388 -
Sto5g4249 2087 Coils Coil 1790 1824 - -
Sto5g4249 2087 Gene3D - 146 301 IPR027417 -
Sto5g4249 2087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1861 1960 IPR027417 -
Sto5g4249 2087 MobiDBLite consensus disorder prediction 1262 1292 - -
Sto5g4249 2087 PRINTS Disease resistance protein signature 174 189 - -
Sto5g4249 2087 PRINTS Disease resistance protein signature 246 260 - -
Sto5g4249 2087 PRINTS Disease resistance protein signature 341 355 - -
Sto5g4249 2087 PRINTS Disease resistance protein signature 848 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4249 Sto-Chr5 51174980 51187088 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4249 172 506 WRKY Transcription Factor Family AT5G45050 25.948 1.44e-10 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4249 - - lang:109340689 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4249 5 51174980 51187088 Sto5g4249 5 51174980 51187088 ECH