Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4231 ATGCTTCAAAGCTTGGTCCCTCGATCATCTCTCACTGCCACGACGTCACCCAGCCCTAATAACGCTACCTCCTCCATGAAGACCAAGCGCGTCGACCGCGACGTGGACGACGAAGCCGGCGACGATCCTTCGTCGTCGTCCTTCAAGCGGCCGAGCTCCGGCAGGAATTTCTCCGGCGAGGCCTCCGTCTCCGGCGAGAAGACGGTGGAGGAAGGCGAGGGGAACGAGGAGCCGACGTTCGAAGGCACCGAATCCACCGGCTTACGACTCCTCGGCTTGTTGCTACAATGCGCCGAGTGCGTCGCCATGGACAACCTCGACGACGCCAGCGACCTCTTGCCGGAGATAGCCGAGCTCTCCTCGCCGTACGGGACATCGCCGGAGCGCGTCGGCGCGTACTTCGCGCACGCGCTCCAATCGCGCGTCGTCAGCTCGTGCCTCGGTACCTACTCGCCTCTCACCACGAAATCGCTCACTCTCGCTCAGTCTCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCCATATCTCCTCTCGTGAAGTTCTCTCACTTCACCGCCAATCAAGCCATCTTCCAGGCTCTGGACGGCGAGGATTGCGTCCACGTCATCGACCTCGACATCATGCAAGGCCTCCAATGGCCTGGATTGTTCCACATCCTCGCCTCCCGCTCGAAGAAGATCCGCTCCATGAGGATCACTGGCTTCGGATCCTCGTCGGAGCTGCTCGAGTCCACCGGCCGGAGACTCGCCGACTTCGCGTCGTCGCTCGGCTTGCCGTTCGAGTTCCATCCCCTGGAAGGCAAAATCGGAAGCGTCACCGAGCTGAGTCAACTCGGCGTGAGGCCGAACGAAGCCATAGTAGTCCACTGGATGCACCATTGCTTGTACGACATCACCGGAAGCGATTTAGGAACGCTGCGATTGCTCACTCTGCTACGGCCGAAGCTGATCACCACCGTCGAGCAGGATCTGAGCCACGCCGGAAGCTTCCTCGCGCGGTTCGTGGAGGCGCTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGTGTGGACAGCACAGAGAGGCATACGGTGGAGCAGCAGATATTTGGGTGCGAGATTAGGAACATCGTGGCCGTTGGTGGGCCCAAGAGAACGGGCGAAGTGAAGGTGGAGAGATGGGGGGAGGAATTGAAGCGGGTCGGGTTTAGACCCGTTTCGCTTCGGGGAAACCCGGCTGCACAAGCGAGCTTATTGTTGGATTCAGAGGGGGACGAGCAACACTGGATAAAAACTCCtgctgcttctgcttcttctgCCATTAGTTTCTTGGGGAAAGTGGGAAGGGATTCTTTTTTGGGTAAATGA 1362 0.583 MLQSLVPRSSLTATTSPSPNNATSSMKTKRVDRDVDDEAGDDPSSSSFKRPSSGRNFSGEASVSGEKTVEEGEGNEEPTFEGTESTGLRLLGLLLQCAECVAMDNLDDASDLLPEIAELSSPYGTSPERVGAYFAHALQSRVVSSCLGTYSPLTTKSLTLAQSQRIFNAFQSYNSISPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGSVTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLSVDSTERHTVEQQIFGCEIRNIVAVGGPKRTGEVKVERWGEELKRVGFRPVSLRGNPAAQASLLLDSEGDEQHWIKTPAASASSAISFLGKVGRDSFLGK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4231 453 MobiDBLite consensus disorder prediction 45 63 - -
Sto5g4231 453 MobiDBLite consensus disorder prediction 1 84 - -
Sto5g4231 453 MobiDBLite consensus disorder prediction 1 26 - -
Sto5g4231 453 PANTHER SCARECROW-LIKE PROTEIN 23 20 419 - -
Sto5g4231 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 419 IPR005202 -
Sto5g4231 453 ProSiteProfiles GRAS family profile. 81 453 IPR005202 -
Sto5g4231 453 MobiDBLite consensus disorder prediction 27 44 - -
Sto5g4231 453 Pfam GRAS domain family 92 426 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4231 Sto-Chr5 51019538 51021048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4231 26 418 GRAS Transcription Factor Family AT5G41920 63.384 4.67e-170 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto5g4231 GRAS 2.3e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4231 - - zju:107404603 618.231