Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4225 ATGGTGAAGTTTCTGAAGCCAAACAAAGCCGTCGCCGTGATTCTCCGTACATTCGATGACGGCACTCGTGACCGCGCGTACGGCCACTGCTTGGTCGCCGGCATCAAGAAGTACCCAAGCAAGGTCATCAGGAAGGACTCCGCCAAGAAGACGGCGAAGAAGTCTCGCGTCAAGGCCTTCGTGAAGCTCGACGTGGTCTCCGTCGACGCTCTTCAGTCCAAGGACAAGAAGGTCACGGCCTTGAAGGAGACGAAGAAGAGGCTCGAGGAGAGGTTCAAGACTGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTGA 321 0.5514 MVKFLKPNKAVAVILRTFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSAKKTAKKSRVKAFVKLDVVSVDALQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4225 106 ProSitePatterns Ribosomal protein L27e signature. 95 106 IPR018262 GO:0003735|GO:0005840|GO:0006412
Sto5g4225 106 Pfam Ribosomal L27e protein family 64 106 IPR001141 GO:0003735|GO:0005840|GO:0006412
Sto5g4225 106 PANTHER 60S RIBOSOMAL PROTEIN L27 1 63 - -
Sto5g4225 106 PANTHER 60S RIBOSOMAL PROTEIN L27 64 106 - -
Sto5g4225 106 Gene3D - 64 106 IPR038655 -
Sto5g4225 106 PANTHER 60S RIBOSOMAL PROTEIN L27 64 106 IPR001141 GO:0003735|GO:0005840|GO:0006412
Sto5g4225 106 PANTHER 60S RIBOSOMAL PROTEIN L27 1 63 IPR001141 GO:0003735|GO:0005840|GO:0006412
Sto5g4225 106 Coils Coil 71 98 - -
Sto5g4225 106 Gene3D - 1 63 IPR038655 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4225 Sto-Chr5 50990323 50990730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4225 1 106 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 65.926 1.80e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4225 K02901 - mnt:21400722 186.808