Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4210 ATGAGTCAGCATAAAGTGAAGCGCCGTGTGGGTAAATATGAGGTGGGGAGGACCATTGGTGAGGGAACATTTGCCAAAGTTAAGTTTGCGAGAAACTCCGAGACTAATGAGCCTGTGGCTATCAAAATTCTGGACAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAGATCAGGCGGGAAATAGCAACGATGAAGTTAATAAAGCATCCAAATGTTGTTCAATTATACGAGGTATCCTCCAGCCACATTGGACTTGGGATTAATTCCTGTCAAGCTAGGAGTGTCGTTATTCCAACTTGTGCCCTCCTCTTTTCAAGAGTTATGGGGAGCcggacaaaaatatatatcgtTTTGGAGTTTGTGACCGGGGGCGAGCTCTTTGACAAAATTGTAAACCATGGACGAATGAGCGAAAACGAAGCACGAAGATATTTTCAGCAGCTAATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTCAAGCCTGAAAATTTGCTACTAGATGCTTATGGAAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCGCTATCACAACAAGTCAAGGATGATGGATTGCTTCATACTACATGTGGAACTCCAAATTATGTTGCTCCCGAGGTCCTTGATGATGGTGGCTATGACGGTGCAATGGCAGACTTGTGGTCATGTGGAGTGATTCTATTCGTGTTGCTTGCAGGTTACTTGCCTTTTGACGAATCTAATCTTATGAACCTTTATAAAAAAATCTCAGCGGCTGAATTTACTTGTCCTCCATGGCTCTCTTTTAGTGCCAGAAAATTAATAACTCGAATCTTGGATCCAAATCCCATGACTCGTATCACTATATCCGAGATATTGGATGATGAATGGTTTAAGAAAGACTATAAGCCTCCTGTTTTCGAGGAGAAAGGCGAGACCAACCTGGATGATGTTGAAGCCGTCTTTAAAGATTCTGAAGAGCACCTAGTGacagagaagaaggaagaacaGCCAACAGCTATTAATGCGTTCGAATTAATTTCAATGTCCAAAGGGCTAAACcttgaaaacttgtttgataTAGAGCAGGGGTTTAAAAGGGAAACAAGGTTCACATCAACATGCCCTGCCAATGAAATAGTCAACAAGATTGAAGAAGCAGCAAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTACAAGATGAGATTGGAGAATGTGAAAGCTGGAAGAAAGGGAAACCTTAATGTTGCCACCGAGGTGACACGTCTGAAGATAGTGGCACCTTCTCTTCACATGGTTGAGGTACGAAAAGCGAAAGGTGATACATTGGAGTTCCACAAGTTTTCCTTTCACTTTGTCACGCAAAATCAACCGCATCAAGAGTTCGATGGAAGGTGGCTCACTTGGAGACTATTGCCAACAACACGGGGTGGCTCACCTGACGAAAGAAATCCGATAGGTGTTTTGCAGTCAAATCCCTTTAATGCCAAAAACCCGTGTTGGTGGTCCCGCCCCTATGCTGATCCTTATGCCAAAGCGCTGAGCGAAGATGCTGTGGGGCCGAAAAGGGATTGCATGCTATTGGCGCCTTGA 1593 0.4225 MSQHKVKRRVGKYEVGRTIGEGTFAKVKFARNSETNEPVAIKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVSSSHIGLGINSCQARSVVIPTCALLFSRVMGSRTKIYIVLEFVTGGELFDKIVNHGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLDDGGYDGAMADLWSCGVILFVLLAGYLPFDESNLMNLYKKISAAEFTCPPWLSFSARKLITRILDPNPMTRITISEILDDEWFKKDYKPPVFEEKGETNLDDVEAVFKDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDIEQGFKRETRFTSTCPANEIVNKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEVTRLKIVAPSLHMVEVRKAKGDTLEFHKFSFHFVTQNQPHQEFDGRWLTWRLLPTTRGGSPDERNPIGVLQSNPFNAKNPCWWSRPYADPYAKALSEDAVGPKRDCMLLAP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4210 530 CDD CIPK_C 341 448 - -
Sto5g4210 530 ProSiteProfiles NAF domain profile. 335 359 IPR018451 GO:0007165
Sto5g4210 530 SUPERFAMILY Protein kinase-like (PK-like) 9 313 IPR011009 -
Sto5g4210 530 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 106 449 - -
Sto5g4210 530 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 2 84 - -
Sto5g4210 530 SMART serkin_6 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4210 530 CDD STKc_SnRK3 12 296 - -
Sto5g4210 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Sto5g4210 530 PANTHER - 106 449 - -
Sto5g4210 530 PANTHER - 2 84 - -
Sto5g4210 530 Gene3D Kinase associated domain 1, KA1 334 456 - -
Sto5g4210 530 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Sto5g4210 530 Pfam Protein kinase domain 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4210 530 Pfam NAF domain 337 396 IPR004041 GO:0007165
Sto5g4210 530 ProSiteProfiles Protein kinase domain profile. 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4210 530 Gene3D Transferase(Phosphotransferase) domain 1 122 325 - -
Sto5g4210 530 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4210 Sto-Chr5 50776470 50781572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4210 3 443 CBL-interacting serine-threonine protein kinases AT2G26980 75.964 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto5g4210 Pkinase 3.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4210 - - qsu:112026068 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4210 5 50776470 50781572 Sto5g4210 5 50776470 50781572 ECH