Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4209 ATGGCTAGCGCTAGATCCTTCTTGCAAGTGGCTACAACGGAGGAGGCTGCACCCCCTCTTCGAGTGATTCAGATGGAGGGATTGGTTATCTTAAAGATAATTAAACATTGCAAGGACCACTCACCTACTTTAGTCACTGGACAACTTCTTGGGCTGGATGTTGGTAGTGTTCTTGAAGTTACTAACTGTTTTCCCTTTCCGATTAGGGAAGAGGATGAGGAAATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAGTCCACATTGCTTGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTATCAGGAGAACATAAGACGCTGTGTTTGCATCATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCGTTGAAGGCCTTGAAGCTTTCTGACTCATTCATGGAACTCTATCGCAGCAATAATATTACAGGAGAAAAACTGAGGGAGAAAAACTTGTCATGGGTGGATATCTTCGAGGAGATACCTATCAAAGTTTCGAACTCTGCCCTCATTAGTGCCTTTATGACCGAGTTGGAACCTGATACACCAGTAACCCAGTGTGATTTTGATCGCCTCCAACTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATCGAGTGCATGGATGATTTGTCAATAGAACAGCAGAAGTTCCAATTTTATTACCGGAGCTTGTCCCGCCAGCAGGCCCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCAGAGAACTTGGCTCGTAAAGCAGCCGGAGAGGACCCTCTACCTGAGGAAGATCCATCAAATCCCATTTTTAAGCCACTCCCGGAGCCATCCCGGCTGGACAGCTTCCTCATAACAAATCAAATTTCCAACTACTGCAACCAAATTAATGGGGTGTCAGGACAGAGCTTTAACAGACTCTATTTGATGAAGGCTTTGCATGAGGACTCATAA 1011 0.4402 MASARSFLQVATTEEAAPPLRVIQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDFDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFYYRSLSRQQAQQQAWLQKRRAENLARKAAGEDPLPEEDPSNPIFKPLPEPSRLDSFLITNQISNYCNQINGVSGQSFNRLYLMKALHEDS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4209 336 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 18 335 IPR027524 GO:0003743|GO:0005737|GO:0005852
Sto5g4209 336 Gene3D Cytidine Deaminase, domain 2 1 211 - -
Sto5g4209 336 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 3 334 - -
Sto5g4209 336 SMART pad1_6 22 155 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g4209 336 CDD MPN_eIF3h 21 284 IPR027524 GO:0003743|GO:0005737|GO:0005852
Sto5g4209 336 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 22 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g4209 336 MobiDBLite consensus disorder prediction 273 292 - -
Sto5g4209 336 ProSiteProfiles MPN domain profile. 23 156 IPR037518 -
Sto5g4209 336 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 3 334 - -
Sto5g4209 336 Pfam C-terminal region of eIF3h 142 334 IPR045810 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4209 86 335 Eukaryotic Initiation Factors Gene Family AT1G10840 82.800 1.20e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4209 K03247 - gmx:100795273 628.246