Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4208 ATGGGAAATTCCTGCAGAAAACCCGTTGCCCATGTGTCTTCCTCTTACATTTCTGGTCTGTATCTGCTATTACTTTCGATAATGTTATGTATTGTCCTCCTTTTTTGGTGTCGATTTACTGTTCTGTTAATCAGACTTGCTGAAGGAAGAGCAAAGTCCCATAGTAAGAAAAATCAGACTTCAAATTCTTCAGAACAAAAAGTTGCATCGCAAAGTTTGGAACCAAACATCAATAAATTCATCTCTGATAATCTTAAATCCTTCAGCTTCAATGAACTAAGGGAAGCCACAAAGAACTTTCGTCAAGAATACTTAATTGGGGAGGGAGGATTTGGGTTTGTTTACAAGGGATGGATTGATGAGAACTCTTTTTCTCCAACGAAACCAGGAAGTGGGATCATAGTGGCCATCAAGAAACTTAAACCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCGGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATCTGGTGAAACTTATTGGCTATTGCTCAGATGCTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAGAATCATTTATTCAGAAAAGGTATTCAACCCATATCTTGGGCTGCACGAATCAACATAGCAGTTAGTGTTGCAAGAGGATTAGCATTTTTGCATACTTTGGATGCAAATGTTATCTATCGTGATTTAAAGGCTTCCAACATCTTACTTGATTCAGGTTTCAATGCAAAGCTTTCAGATTTTGGCTTGGCAAGAGATGGACCTACTGGAGATAACACTCATGTTTCAACTAGAATTATTGGAACTCAAGGTTATGCTGCACCAGAGTATGTAGCTTCAGGTCACTTGACCCCAATGAGTGATGTATACAGCTTTGGCGTTGTCTTGTTAGAGTTACTAACTGGGAGACGGGCAGTAGAAGGTAGGACACCCGGAAATTCACAAGAAACTCTGGTGGATTGGGCAACGCCTTTTCTGAGTAACGGCAAGCGAGTTTCAAGAATCATGGATATGAGGTTGGGTGGTCAATACTCCAAGAGAGGAGCTCAAGCTGCAGCTTCACTTGCATTTCAATGCCTTAATTATGACCCCAAATGCAGACCAACTATGATAGATGTTCTAGCCACATTGGAGGAACTTCATTCTTCAAATACAACAATCCCAAGGACTCCACCAAAATCTGGGACTGAGAATCATGGAGTCAAGCATTCTAGTCACTCCAAGAAGCCAATGAGAAATGCAAAGTAA 1260 0.4048 MGNSCRKPVAHVSSSYISGLYLLLLSIMLCIVLLFWCRFTVLLIRLAEGRAKSHSKKNQTSNSSEQKVASQSLEPNINKFISDNLKSFSFNELREATKNFRQEYLIGEGGFGFVYKGWIDENSFSPTKPGSGIIVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSDAKNRLLVYEFMQKGSLENHLFRKGIQPISWAARINIAVSVARGLAFLHTLDANVIYRDLKASNILLDSGFNAKLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVASGHLTPMSDVYSFGVVLLELLTGRRAVEGRTPGNSQETLVDWATPFLSNGKRVSRIMDMRLGGQYSKRGAQAAASLAFQCLNYDPKCRPTMIDVLATLEELHSSNTTIPRTPPKSGTENHGVKHSSHSKKPMRNAK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4208 419 MobiDBLite consensus disorder prediction 386 419 - -
Sto5g4208 419 Gene3D Transferase(Phosphotransferase) domain 1 186 397 - -
Sto5g4208 419 CDD STKc_IRAK 106 384 - -
Sto5g4208 419 Gene3D Phosphorylase Kinase; domain 1 73 185 - -
Sto5g4208 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Sto5g4208 419 Pfam Protein kinase domain 102 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4208 419 ProSiteProfiles Protein kinase domain profile. 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4208 419 PANTHER OS01G0588500 PROTEIN-RELATED 46 410 - -
Sto5g4208 419 PANTHER TYROSINE KINASE FAMILY PROTEIN 46 410 - -
Sto5g4208 419 SUPERFAMILY Protein kinase-like (PK-like) 75 382 IPR011009 -
Sto5g4208 419 SMART serkin_6 100 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4208 419 ProSitePatterns Protein kinases ATP-binding region signature. 106 139 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4208 Sto-Chr5 50744072 50747648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4208 58 401 Glycoside Hydrolase AT3G07070 46.610 1.09e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto5g4208 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4208 - - gmx:102664409 590.112