Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4203 ATGAATACGATACACTATACTAGGCTTGATCGAAGATTTATCTCGTGGAGTGACGCAATCCCTCAAGGAACCAGACTCATCGAAACCTATGAGAAGTTGGACAAAATTGGCGACGGAACTTTTAGTGAAGTTTTTAAGGCTAGAGACCAATTGAATGGTGACGTTGTTGCTCTCAAGCAAATTCGGTTGGATTTTCTTGAGGCCGATGtgGAGCGGAAATTTCTGTCTATTATTAATGAATTCgaaattttaaaggaattggATCATGAAAATGTGATCAAGCTCAAGGAATCCATTTTTCCAGTGCCTGAGAGAGATTGGAcagATAACAATAGTATGAGAAATGGCATCTATTTCGTATTTGAATACATGGAACATGATTTGCGAGGCCTTATTTGTCAGCCTACCTGGTTTAACAATTTGATGCCTGGTCAAATTAAGCTTTTGACGGGGCTTCAATATTGTCACGAAAAACAAATAATTCATCGTGACATCAAAGCTATGAATATTCTTATAAACAATAAAGGAATCTTGAAGATTGCAGATTTTGGAGTGGCCAAGGCAATTACTAGTGACCGCAAGGATCAACATAGTTCAGATCGTATTATGGCATCTTGGTACAGGCCCCCAGAGATATTCCTAGGGGCAGAACAATATGGGACAGCCGTTGATATTTGGTCTGCTGGGTGCATTTTTGCTGAGCTTCTTACCGGCCGGCATATTTTCAGGGGAGAAACTCTGCTATCTAATAAACAGCTTTCTTATTATTACTTCCATTACAGTGTTGACGAACATGCTATGAACTTGTTGGAGAGGATGTTAACGCTTGATCCTAATCAGAGAATTACTGCTGAGGATGCACTTAATGCTGAGTATTTCCATACTGATCCATTACCTATCGATCCCAAGATTTTACCCGAGTTTGAGTCACAACTTACCTATGTGCTGAAGAGAAGGTGGGATCATCTTGCATCTAGCAGCGCTCATCCTCCGAAcagtcctcctcctcctcctccgccgGCTAGgtctcctccttcttctccttctcctccgcCTCCGTCTCCTCCTACTACTCCTCCTTCTCCTCCCCTTCCTTGTTCTGAAGGTGGAGGCGGAGTTGGTAGTGGCAGTGCCTAA 1137 0.3896 MNTIHYTRLDRRFISWSDAIPQGTRLIETYEKLDKIGDGTFSEVFKARDQLNGDVVALKQIRLDFLEADVERKFLSIINEFEILKELDHENVIKLKESIFPVPERDWTDNNSMRNGIYFVFEYMEHDLRGLICQPTWFNNLMPGQIKLLTGLQYCHEKQIIHRDIKAMNILINNKGILKIADFGVAKAITSDRKDQHSSDRIMASWYRPPEIFLGAEQYGTAVDIWSAGCIFAELLTGRHIFRGETLLSNKQLSYYYFHYSVDEHAMNLLERMLTLDPNQRITAEDALNAEYFHTDPLPIDPKILPEFESQLTYVLKRRWDHLASSSAHPPNSPPPPPPPARSPPSSPSPPPPSPPTTPPSPPLPCSEGGGGVGSGSA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4203 378 ProSiteProfiles Protein kinase domain profile. 30 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4203 378 SUPERFAMILY Protein kinase-like (PK-like) 23 300 IPR011009 -
Sto5g4203 378 MobiDBLite consensus disorder prediction 324 378 - -
Sto5g4203 378 MobiDBLite consensus disorder prediction 329 366 - -
Sto5g4203 378 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Sto5g4203 378 Gene3D Phosphorylase Kinase; domain 1 18 125 - -
Sto5g4203 378 Pfam Protein kinase domain 30 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4203 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Sto5g4203 378 PANTHER CELL DIVISION PROTEIN KINASE 22 245 - -
Sto5g4203 378 PANTHER CELL DIVISION PROTEIN KINASE 261 319 - -
Sto5g4203 378 Gene3D Transferase(Phosphotransferase) domain 1 145 321 - -
Sto5g4203 378 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 261 319 - -
Sto5g4203 378 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 22 245 - -
Sto5g4203 378 SMART serkin_6 30 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4203 Sto-Chr5 50718565 50721056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4203 23 319 Core Cell Cycle Gene Families AT5G10270 43.860 1.28e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto5g4203 Pkinase 8.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4203 K08819 - sind:105170978 273.092