Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4199 ATGACGACGACGATATACGGTGTAAGGATTGATGGAAAATTCACGACGTGGAGTAAGGAAATCCCTCAAGGAACCAGACTCATCCAAACCTATGACAATGAGGTTTTCAAGGCTAAAGACAAACTGACTGGTGAAGTTGTTGCTCTCAAGCAAATTCGGTTCGACTTTAATGACAGAgatgtgATTGAGAAATATAAGGCTGTTCGTAATGAATTCGAAATTGTAAGGGAATTGGATCATGAAAATGTGATCAAGCTTAAGGAATCCATTTTTCCAGTGCCTGACAGAGATTGGACAGATGAGaataatagaagaaatggcaTCTATTTTGTATTTGAATACATGGAACATGATTTGCGAGCTATGAATATTCTTATAAACAATAAAGGAATCCTGAAGCTTGCAGATTTTGGGGTGGCCAAGTCACTTACTAGTAAACGCAAGGAAAAGAGTTCAAATCAAGTTATTGCATCTTGGTACAGGCCCCCTGAGCTGCTGCTAGGGGCAACACAATATGGGACAGCCGTTGATATTTGGTCTGCTGGATGCATTTTTGCTGAGCTTCTTACCGGCCGGAAATTTTTCAGTGCAGAAACTCCTCGCATTTTTGAGGTGTGTGGATCACCAGATGAGACTAACTGGCCTGGGGTATCTAATCTTCCTCGCTATACAGAACTGAAGCCACCAGAACCACTATCTAATAAACAGCTTTCTTATTATTACTTCCATTATAGAGTTAACGAACATGCTGTGAACTTGCTGGAGAGGATGTTAACGCTTGATCCTaatcagAGAATTACTGCTGAGGATGCACTTAAAGCTGACTATTTCCATACTGATCCATTACCTATTGATCCCAAGAAACACATCGAtcctcccttcttcctcttcttcttgttGGAAGATTTCAACGATACGTACGTAATGAATTCGTTACACATTATTAGGCTTGATCAAGGATTTACCAAGTGGAGTGACGCAATCCCTCAAGGAACCAGACTCATCCAAAACTATGAGAAGTTGGACAAAATTGGCGACGGAACTTTTAGTGAAGTTTTCAAGGCTAGAGACCAACTGAATGGTGAAGTTGTTGCTCTCAAGCAAATTCGGTTGGATTTTCTTGACGACGATGtgGAGACGAAATTTCAGGCTATTATTAATGAATTCgaaattttaaaggaattggATCATGAAAATGTGATCAAGCTCAAGGAATCCATTTTTCCAGAGCCTGAGAGAGATTGGGCAGTTGAGAGTGATATGAGAAATGGCATCTATTTCGTATTTGAATACATGGAACATGATTTGCGAGGTCTTATTCTTCAGCCTACCTGGTTTAACAATTTGATGCCTGGTCAAATTAAGCTTTTGACGGGGCTTCAATATTGTCATGAAAAACAAATAATTCATCGTGACATCAAAGCTATGAATATTCTTATAAACAATAAAGGAATCCTGAAGATTGCAGATTTTGGAATGGCCAAGGCAATTACTAGTGACCGCAAGGATCAACATAGTTCAGATCGTATTATGGCATCTTGGTACAGGCCCCCAGAGATATTCCTAGGGGCAGAAGAATATGGGACAGCCGTTGATATTTGGTCTGCTGGGTGCATTTTTGCTGAGCTTCTTACCGGCCGGCATATTTTCAGGGGAAAAACTCTGCTATCTAATAAACAGCTTTCTTATTATTACTTCCATTACAGTGTTGACGAACATGCTATGAACTTGTTGGAGAGGATGTTAACGCTTGATCCTAATCAGAGAATTACTGCTGAGGATGCACTTAATGCTGAGTATTTCCATACTGATCCATTACCTATCGATCCCAAGATGTATGATTTCTCTTTGACTCCTTTTGTGGAGGCGGAGTTGGTAGTGGCAGTGCCTAAGAAGGTGGAGCTCCAAGTCAACCTCAAGGTGAATTCTCTGATAAGCAGAGTGATAGCAAGAAAACAGAACAGACATATTCATTGA 1977 0.389 MTTTIYGVRIDGKFTTWSKEIPQGTRLIQTYDNEVFKAKDKLTGEVVALKQIRFDFNDRDVIEKYKAVRNEFEIVRELDHENVIKLKESIFPVPDRDWTDENNRRNGIYFVFEYMEHDLRAMNILINNKGILKLADFGVAKSLTSKRKEKSSNQVIASWYRPPELLLGATQYGTAVDIWSAGCIFAELLTGRKFFSAETPRIFEVCGSPDETNWPGVSNLPRYTELKPPEPLSNKQLSYYYFHYRVNEHAVNLLERMLTLDPNQRITAEDALKADYFHTDPLPIDPKKHIDPPFFLFFLLEDFNDTYVMNSLHIIRLDQGFTKWSDAIPQGTRLIQNYEKLDKIGDGTFSEVFKARDQLNGEVVALKQIRLDFLDDDVETKFQAIINEFEILKELDHENVIKLKESIFPEPERDWAVESDMRNGIYFVFEYMEHDLRGLILQPTWFNNLMPGQIKLLTGLQYCHEKQIIHRDIKAMNILINNKGILKIADFGMAKAITSDRKDQHSSDRIMASWYRPPEIFLGAEEYGTAVDIWSAGCIFAELLTGRHIFRGKTLLSNKQLSYYYFHYSVDEHAMNLLERMLTLDPNQRITAEDALNAEYFHTDPLPIDPKMYDFSLTPFVEAELVVAVPKKVELQVNLKVNSLISRVIARKQNRHIH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4199 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Sto5g4199 658 Gene3D Phosphorylase Kinase; domain 1 331 444 - -
Sto5g4199 658 ProSiteProfiles Protein kinase domain profile. 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 Pfam Protein kinase domain 118 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 Pfam Protein kinase domain 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 330 553 - -
Sto5g4199 658 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 569 612 - -
Sto5g4199 658 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 30 120 - -
Sto5g4199 658 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 118 288 - -
Sto5g4199 658 SUPERFAMILY Protein kinase-like (PK-like) 331 608 IPR011009 -
Sto5g4199 658 Gene3D Phosphorylase Kinase; domain 1 24 114 - -
Sto5g4199 658 Gene3D Transferase(Phosphotransferase) domain 1 453 614 - -
Sto5g4199 658 Gene3D Transferase(Phosphotransferase) domain 1 115 290 - -
Sto5g4199 658 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Sto5g4199 658 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 SUPERFAMILY Protein kinase-like (PK-like) 34 284 IPR011009 -
Sto5g4199 658 SMART serkin_6 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 SMART serkin_6 31 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4199 658 PANTHER CELL DIVISION PROTEIN KINASE 330 553 - -
Sto5g4199 658 PANTHER CELL DIVISION PROTEIN KINASE 569 612 - -
Sto5g4199 658 PANTHER CELL DIVISION PROTEIN KINASE 118 288 - -
Sto5g4199 658 PANTHER CELL DIVISION PROTEIN KINASE 30 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4199 Sto-Chr5 50688835 50696745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4199 331 611 Core Cell Cycle Gene Families AT5G10270 44.308 5.18e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto5g4199 Pkinase 2.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4199 K08819 - sind:105170978 259.225