Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4190 TTGCCTGGACGTACCGATAACGAGATAAAGAACTATTGGAATACTAGAGTTAAGAGAATGAGACGAGCTGGCTTATCTCCTTATCCTGATTACATAAGCCAGCAGGTATTAAACAACAGTGAAGAAAATCCAAATGTGGATACGTTGATGAATGGAACCAACCAGCATTCCAAACCCTCACAAGAAGACCTTTTTGATATCCCAGACATTGACATAAATTATGATCCCAGTCGAGGTTATCAACCATATGGATCATCAATTTTAGATATTCCTGAAGGTGGCCTGATTGAACAAATTGCAGGCTCACTTGATAGTAATAATGTAAGGTTGCGAGCTATGTATCCTCCAAAACGCCTTCGGGACTCGGATATCTTTTACAATGGTGGGTTTGTGGATTATAGTGCTAAGCCGCTCCGTCAGTTGTCTTCTCCATGTGATCCAATCCTCAACTCCAATGATCAGTTTCATGATCAATTTCATGGCAGCCATGCCTTTTTAAATGGCATTACCTCTTCTTCAGCGCCCATGTCTGAGGCAATGAAGTTGGAGCTCCCTTCACTCCAATATTTGGAAACCCAAAATGATAGCTGGGGTGATCTTGTATCCCCACTTCCTTCCATGGAGTCTATCAATACAATGATTCAATCTTCTCCTACAGAACAGTATCAGTCATGTTCTGTTTCTCGAGAGAACAGTGGTTTGTTGGAAGACATACTCCATGAATTCAAGCTTCCGAGAGGCCTGAACAATGCTTCAATGTGGCAGACTCCTGATAATTGCATACcgaataaagtaattaaaagtTCAAACCTGAAAACCAGTGAGACAGAATGGGAGTGGCAAGGAGGGGATTCAACCTCTTCCTTAGGTCACTCTTCTGGTTCAGTTCTTACAGATTATACTCCTCCTCTAAGCATGTGTTCAGTTGATGAAACCCACATAGTTGAACTCACAAAAGGTCATGATATGAATCATGAAGCAGTTTCACAAGGTCCACCTACTAATCATATAAGCTTTACAAGGCCAGATGCTTTACTTGACCAGTGTTGGTTTTTTAATGAAACCAGGAATGAAGATCTTCTCAAAGATGCTAGACAAGGgattgaagatgatgatggtgctGATAATTCAGGAACAAGAATGGGATTTGAAAAAGATACATATGATATTTGA 1173 0.3947 LPGRTDNEIKNYWNTRVKRMRRAGLSPYPDYISQQVLNNSEENPNVDTLMNGTNQHSKPSQEDLFDIPDIDINYDPSRGYQPYGSSILDIPEGGLIEQIAGSLDSNNVRLRAMYPPKRLRDSDIFYNGGFVDYSAKPLRQLSSPCDPILNSNDQFHDQFHGSHAFLNGITSSSAPMSEAMKLELPSLQYLETQNDSWGDLVSPLPSMESINTMIQSSPTEQYQSCSVSRENSGLLEDILHEFKLPRGLNNASMWQTPDNCIPNKVIKSSNLKTSETEWEWQGGDSTSSLGHSSGSVLTDYTPPLSMCSVDETHIVELTKGHDMNHEAVSQGPPTNHISFTRPDALLDQCWFFNETRNEDLLKDARQGIEDDDGADNSGTRMGFEKDTYDI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4190 390 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 354 - -
Sto5g4190 390 Gene3D - 1 43 - -
Sto5g4190 390 MobiDBLite consensus disorder prediction 368 390 - -
Sto5g4190 390 MobiDBLite consensus disorder prediction 42 61 - -
Sto5g4190 390 MobiDBLite consensus disorder prediction 42 62 - -
Sto5g4190 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 21 IPR017930 -
Sto5g4190 390 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4190 Sto-Chr5 50625790 50627435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4190 1 351 MYB Transcription Factor Family AT3G11440 29.040 1.07e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4190 K09422 - gmx:100800658 288.5