Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4185 atgaaaaatctaGTTCAGCTTGATCTAGAGGATACTGGTATAACAGAGCTACCTGAATCAATTGAGTTCTTGGCTGGTCTTGtagatttgaatttaaaatactGCTCTAGTCTTGTTGGCCTTCCTCGCACATTTCACAATTTGAAGCTTCTTAAAACACTCAATATGTTTGGCTGCTCGAACTTTTCTGAGTTTCCAGAGCGTATAAATGAAAATGAGGCCTTGGAAAACCTTGATGCCAATGAAACTTCCATGAACGAAGTGCCTTCATTCAGTTTATGGAGTTTACACTTTTTCAAGGGCTTTAATCTGACATCATTGACAGAATTAAATATAAGCTACTGTCGAATTGATGATGGATTGATTCTTGATGATGAACAATTatggtttttcttttcttcacttAACCATCAGCTTCGCTGCCGTACTAAATATTTAGGCACACAACTCTCTGACATTAAGTCAGAGTATCTTCCATTTAGAGATTTTTATGCAACTATTCCGGGGAGTGAAGTACCATCATGGTTTCCTAACTATATGCAAGTTAGAGAAGATAATAGAGGGAgatcaagtttttcaataatAGTGGACATCCCGCAATCTTTTCGTGCAAGTGAATGGTCAGGAATTGCTGTATGCCTTCTCATTAATTATGACAGTTATGGACCTCGATTTCCCAAGCCTTATCTTTGCTGGACTTGTAAAGCCCCTGAAGATGATAGTTATATAAGCAAAGGATGGGCACATGTTTTTGATTACTCCAACAATATTGGTCGCATTTGTCCTCACCTTTGTCTAATGCTTTTCCATTGCAATGATCAAACATGTTGGCAACATCTGAGAGGTGATAACAACTGGCTTCAAATAGTATTTACTGCAATGTGGGCTGGACTTATAAAGAAGTGTGGTTGGCGAGTATTATGTAGAGAAGAGATGGAAGAGTGGTGCAAAACAAATTATGAGTGCAACAAATTATATGATGCAGAGGTTGGCATTTCTGAGGTCTGGCTTCCTAACTCCGCAGTGAAGAAAACTCTGGAAATCTTTCAAGTGCCACCAAAttcaaacagaaaaagaaaaagagaagaatag 1092 0.3571 MKNLVQLDLEDTGITELPESIEFLAGLVDLNLKYCSSLVGLPRTFHNLKLLKTLNMFGCSNFSEFPERINENEALENLDANETSMNEVPSFSLWSLHFFKGFNLTSLTELNISYCRIDDGLILDDEQLWFFFSSLNHQLRCRTKYLGTQLSDIKSEYLPFRDFYATIPGSEVPSWFPNYMQVREDNRGRSSFSIIVDIPQSFRASEWSGIAVCLLINYDSYGPRFPKPYLCWTCKAPEDDSYISKGWAHVFDYSNNIGRICPHLCLMLFHCNDQTCWQHLRGDNNWLQIVFTAMWAGLIKKCGWRVLCREEMEEWCKTNYECNKLYDAEVGISEVWLPNSAVKKTLEIFQVPPNSNRKRKREE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4185 363 PANTHER TMV RESISTANCE PROTEIN N-LIKE 1 97 - -
Sto5g4185 363 SUPERFAMILY RNI-like 2 124 - -
Sto5g4185 363 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 97 - -
Sto5g4185 363 Gene3D Ribonuclease Inhibitor 1 202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4185 Sto-Chr5 50560559 50562486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4185 3 90 WRKY Transcription Factor Family AT4G12020 36.364 9.39e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4185 - - vun:114195147 91.2781