Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4182 ATGGAACCACATACGGATTCCTCATCCTCCGAGGCGGATGAGGGGGAGTTCTTTGATGAGGCTTCAATAGTCTCTTTCTTTGACAACGAAGAGGATCTCCTAATCGAGCAGTTGGAAAAGGAGTACGAAGAACAGGAGAGAGACCAGAAGATGAGGCTTGATGATGGCCTTGAAGGGGTGGCTTCCCTCTTAGGGATGGATGTGCATGAAAGCAACATGAATGTTAATAGTAAAGGCATCCTCGCTATGCCAGACGAGGGTCATATGACACATGAGAAGTTAGTTCTTAGTGGTTGCTCCAAAGTTACAAAGCTTCCAGAGTTTGGAGAAAGTATGGAAGACCTATCATTGCTTGATCTAGAGAATACAGCTATAGTTGAACTGCCTGAATCACTTGGGTTCTTAATTGGTCTTGTAACCTTGAATTTGAAAGGTTGCAAAAATCTTGTTTGTCTTCCTCGTACATTCAAAAATTTGAAGTATCTCAAAActctcaatatgtttggttcctcaaaattttctaagTTGCCTGATGATTTGAATGAAAATGAGGCGTTGGAAAACCTTGATGTGGGTGAAACTTCCATAACAGAAGTACCTCCATCCATTGCTCAATTGAGAAATCTCAAGGCAATTTCCTTTTATGGATGTAAAGGGCCAGCATGCAACACATTGGGTTTACCCCACTTCCTGGGGAGGATGTTAGGATGGAATCCAGTTCCCATGAGCTTAGTCTTGCCTCCTCTCTCCTCTTTGACATCATTGAGAGAATTAAATTTAAGCTATTGTGGTCTTGATGATGGATCAATTCCTGGTGATATTAGTTGCTTATCATCCTTACAAAATCTGGAATTAAGGGGAAACAATTTTGTTAACCTACCTACTGGTTGCATCTCTAATCTTCTGAAACTACAATTTCTTAATTTGAGTTGCTGTCCGAGGCTAAAGTCACTGCCAAATCTTCCGGCACATTTAGTGCGATTAGATGCAGGAGATTGTTCATCTTTGGAATCTTTATCTGATGAGCAACTATGGTATCACTTTTCTTTGCTTGATCACCAGggTCGTTACCGAAGGGATGATTTACATATGTTTTCAAATGCTAATTTTAAGAAGGAGAACTGTTATCCTCATAATGATTTTATTGCATTGATGCCTGGAAGTGAAGTGCCATCATGGTTTCCCAATAGAAATGATTCTTGTCTACTCAAGGAAAATGAAGTGGCATTTTTAACAATAGACATCTCTGAATGTTGTGGTGTAAGTGAATGGTCAAGAGTTGCTATATGCCTTGTGCTTGATCTGTTTGCTTATGAAGACAATACGGTGTCTCATCCTTCTCATCACTCGGCTGTTAATCCCCCTTTCATTTGGTGGGGTTGTGATGTTCCATATGATAAGGCGATTCCACTTTCTTGGGGACATACTATAAATGCAGAGGAGGGAGATTATCCTCTACTTTGTTTTATGCTTCTGAATTTCAGTGATCAAAGACGTTGGCAACATCTTATTAGAAATGACAGCAACCGAATTGAAATATCAATTGACATTGTGGAAAACAGGCATGAATCAGATCTCATTGAAAACATTGTTGGAGCAATATGGACCAAATTATGGTCTAGTTTGCCATCTTACAATGACAATCTAGTTGGAATTGAGTCAAGGATTGTTGAAATGAGTTCACTCTTGAAAATAGGATTGGATGATGGAACTGAAGCAATACAAGGTATGGTTTTGGACTTACAGGAGCCATATGAAGCATATTGGGTTCCTGAAGCTTTTGCACAAATGCGTAATCTTAGATTACTCATTCTGTCTAGTGAGtgtTTGGGAAAGCTAAAGTTTATTGACGTGAGCCATTCCCAAAATTTGATCAAGACTCCAAATTTTGTCGGGGTTCCAAATTTGGAAAGATTAATTCTTGAAGGCTGCATATCTCTTGTTGAAGTTCATCCATCTCTTGGAGAGTTGAAAATGCTTGTTGAAGATACTCTTATAACAGAACTTCCTGAATCATTTGGGTTCTTGACTGGTCTTGAACATTTGAACTTGAAAGGCTGCAAAAATCTTGTTAGCCTTCCCCATACCTTCAACAAGTTGAAGCATCTTAGAACTCTCAATTTGTCAAGTTGCTCAAAATTTTCCAAGCTACCagaaaatttgaatgaaaatgaAGCTTTGGAAAACCTTGATGCGTCCAATTCCCATGGGCTTAAGGCATTGCCAAATCTTCCACCGGGTTTAGTACGATTAAATGCAGGAAATTGTCCTTCAATGGAACCTTTATCAGATGAACAACTATGGTATCACTTTTCTTCACTTGATTCTCAGTTTCCTCGCAGATCTGATAACTTCCATATACCTGGGCCTCATAGATCCGATGATTTTCATAATATTTATGCATCAGTTGGGTCACCCCTTAACTATAGAGATTTCATGGTATGTATTCCGGGAAATGAAATACTTTCATGGTTTCCCGATAAAAAAGAATGCCTTCCAGCTTCTGAAGATTCAAACATATCACGCATATCAATGACAATAGACATCCCTCAATGTTGTCTTGAAAGTGAATGGTCAAGAATTGCTCTATGTCATGCTCTTGATCTGTTTGATCACAGCACTCCGGATGACCCTATAGAAATGGCATATGCCATTGGGCGATCTGCTAATGAAGTTACCACCCTTCGTGGACATGCCATTATTGCAGAGGGAGACTATCCTCACCTTTGCATCATTATCTATGAAATGAAAATCATAAAGTTGTTCAGAGCATGGAATCTAAAGGAGTGGCAATGGTGTGGAAGCTTTGCGCTAACAAAAGTGTTCCTGAAACAGCTTGTCAGCACAGATATTGCTGGCTCTATAAATATGCTTCAGGTTCACTTCCCAGTTTTGGTCCAGAAGCTTCCTTATGTTCTGAATCATAGGCTTGGGgtctTTCAACATCGACCTGATTTGATTAGTGAAGCTTCATTTCTTCTCTTAGATAAGTATAGTACTTAG 3003 0.3869 MEPHTDSSSSEADEGEFFDEASIVSFFDNEEDLLIEQLEKEYEEQERDQKMRLDDGLEGVASLLGMDVHESNMNVNSKGILAMPDEGHMTHEKLVLSGCSKVTKLPEFGESMEDLSLLDLENTAIVELPESLGFLIGLVTLNLKGCKNLVCLPRTFKNLKYLKTLNMFGSSKFSKLPDDLNENEALENLDVGETSITEVPPSIAQLRNLKAISFYGCKGPACNTLGLPHFLGRMLGWNPVPMSLVLPPLSSLTSLRELNLSYCGLDDGSIPGDISCLSSLQNLELRGNNFVNLPTGCISNLLKLQFLNLSCCPRLKSLPNLPAHLVRLDAGDCSSLESLSDEQLWYHFSLLDHQGRYRRDDLHMFSNANFKKENCYPHNDFIALMPGSEVPSWFPNRNDSCLLKENEVAFLTIDISECCGVSEWSRVAICLVLDLFAYEDNTVSHPSHHSAVNPPFIWWGCDVPYDKAIPLSWGHTINAEEGDYPLLCFMLLNFSDQRRWQHLIRNDSNRIEISIDIVENRHESDLIENIVGAIWTKLWSSLPSYNDNLVGIESRIVEMSSLLKIGLDDGTEAIQGMVLDLQEPYEAYWVPEAFAQMRNLRLLILSSECLGKLKFIDVSHSQNLIKTPNFVGVPNLERLILEGCISLVEVHPSLGELKMLVEDTLITELPESFGFLTGLEHLNLKGCKNLVSLPHTFNKLKHLRTLNLSSCSKFSKLPENLNENEALENLDASNSHGLKALPNLPPGLVRLNAGNCPSMEPLSDEQLWYHFSSLDSQFPRRSDNFHIPGPHRSDDFHNIYASVGSPLNYRDFMVCIPGNEILSWFPDKKECLPASEDSNISRISMTIDIPQCCLESEWSRIALCHALDLFDHSTPDDPIEMAYAIGRSANEVTTLRGHAIIAEGDYPHLCIIIYEMKIIKLFRAWNLKEWQWCGSFALTKVFLKQLVSTDIAGSINMLQVHFPVLVQKLPYVLNHRLGVFQHRPDLISEASFLLLDKYST 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4182 1000 PANTHER - 92 344 - -
Sto5g4182 1000 PANTHER - 661 731 - -
Sto5g4182 1000 PANTHER - 612 661 - -
Sto5g4182 1000 SUPERFAMILY L domain-like 93 350 - -
Sto5g4182 1000 Coils Coil 28 55 - -
Sto5g4182 1000 SUPERFAMILY L domain-like 577 774 - -
Sto5g4182 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 661 731 IPR044974 GO:0006952
Sto5g4182 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 92 344 IPR044974 GO:0006952
Sto5g4182 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 612 661 IPR044974 GO:0006952
Sto5g4182 1000 Gene3D Ribonuclease Inhibitor 88 219 IPR032675 -
Sto5g4182 1000 Gene3D Ribonuclease Inhibitor 496 774 IPR032675 -
Sto5g4182 1000 Gene3D Ribonuclease Inhibitor 235 372 IPR032675 -
Sto5g4182 1000 SMART LRR_typ_2 112 135 IPR003591 -
Sto5g4182 1000 SMART LRR_typ_2 252 276 IPR003591 -
Sto5g4182 1000 SMART LRR_typ_2 277 300 IPR003591 -
Sto5g4182 1000 SMART LRR_typ_2 700 724 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4182 Sto-Chr5 50536974 50554743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4182 612 743 WRKY Transcription Factor Family AT4G12020 37.037 5.96e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4182 - - var:108321227 254.218